Gene Amir_1250 details

Gene Information

• Locus tag: Amir_1250
• ID: 8325427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 1392928
• End bp: 1393491
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644941795
• Product: putative metalloprotease
• Protein accession: YP_003099048
• Protein GI: 256375388
• COG category: [R] General function prediction only
• COG ID: [COG0319] Predicted metal-dependent hydrolase
• TIGRFAM ID: [TIGR00043] metalloprotein, YbeY/UPF0054 family

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCATCG AGATCGCTAA CGAGTCGGGC GCGCAGGTCG ACGAGGCTTC CATCGTCGCC 
GCCGCCCGGT TCGCGTTGGA CCGCATGGGG GTCAGCCCGC TGGCGGAGCT GTCCGTGCTG 
CTGGTCGAGC TGGACGTGAT GGCCGACCTG CACCAGCGCT GGATGGACCT GCCCGGCCCG 
ACCGACGTGA TGGCCTTCCC CATGGACGAG CTGGACTCGG CCCGCCGCCC CGACGCGGCC 
GGGCTCGGGC CCGCGCTGCT GGGCGACATC GTGCTGTGCC CCGCGTTCGC CGAGGACCAG 
GCCGCCAAGG CGGGCCACAG CCTGATGGAC GAGCTGCACC TGCTGACCGT GCACGGCGTG 
CTGCACCTGC TGGGCTACGA CCACGCCGAG CCCGCCGAGG AGCGCGAGAT GTTCACGCTC 
CAGAACCGCA TCCTGGGCGA CTACCGGGGT TCGATCGCGG AGGCCGAGCG GAAGACGGCC 
CAGCGCGCGG CGGACTCCAA GCTGCTGGGC GCCGCGGGGC TGGAGGACGA CGGTCCCGAG 
CGACCCGCCG AGCCGAGCGC CTGA 

 

Protein sequence

MSIEIANESG AQVDEASIVA AARFALDRMG VSPLAELSVL LVELDVMADL HQRWMDLPGP 
TDVMAFPMDE LDSARRPDAA GLGPALLGDI VLCPAFAEDQ AAKAGHSLMD ELHLLTVHGV 
LHLLGYDHAE PAEEREMFTL QNRILGDYRG SIAEAERKTA QRAADSKLLG AAGLEDDGPE 
RPAEPSA