Gene Amir_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1214 
Symbol 
ID8325391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1357306 
End bp1358250 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content73% 
IMG OID644941759 
Productprotein of unknown function DUF403 
Protein accessionYP_003099012 
Protein GI256375352 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGCCC GCAACGCCGA GTCGCTGTAC TGGATCGGCC GCTACGTGGA GCGCGCCGAC 
GACACCGCCC GCATCCTCGA CGTCTCGGTG CACCAGCTGC TGGAGGACGC CACCGTCGAC
CCGGACAGCA CCAGCCGCAG GCTGCTCGCC GTCCTCGGCA TCGCGCCACC GGCCGGGCTG
AGCCTGGACG TGTGGTCGCT GACCGAGCTG GTCGCCTACT CCGAGGACAA CGCCGGGTCC
ATCGTCGCCT CCGTCAACAG CGCCCGCGAG AACACCAGGG GCGCGCGCGA GGTCGTCTCC
ACCGAGATGT GGGAGTGCCT CAACGCCATG TACAACGCCG TGGAGGAGCG GCAGGCGTAC
GCGCGGGCCA TGGGTCCGCA CGCGTTCTTC GCGTTCGTGG AGGAGCGGGC CGCCATGTTC
GCCGGGCTCG CCGACTCCAC GATGAGCCGC GACGACGGCT GGCGGTTCCT GGTGCTGGGG
CGGTCGGTCG AGCGGGTCGA CATGATCGTG CGGCTGCTGC TGTCCCGCGT CGGCGACCGC
GCGTCCTCGC CGGGCTGGGT GACCGTGCTG CGCTCGGCCG GGGCCCACGA CACCTACCTG
CGCACCTACC GGGGCGCGCT GGACGCCGGG CGCGTCGTGC AGTTCCTGCT GCTGGACCGG
CTGTTCCCGC GCTCGGTGTT CCACGCGCTG CGGCAGGCCG AGGCGTGCCT CGAGCAGCTC
GACCACCAGC CGACCGTGCG CGTCGGGGCG CGCGCCGAGG CGCTGCGGCT GCTCGGGCGG
GCCCGCAGCG ACCTGGAGTT CCTGCGCCCG CACGACCTGC TGGACGACCT GCCGCGCAGG
CTCGCCGCCC TCCAGACCAC CGTGCGCGAG GTCGGCGAAG CGGTGTCCCT GCAGTACTTC
CACACCGCGC CCTGGGTGGC CTGGACGAAC GCCGAGGTGC ACTAG
 
Protein sequence
MLARNAESLY WIGRYVERAD DTARILDVSV HQLLEDATVD PDSTSRRLLA VLGIAPPAGL 
SLDVWSLTEL VAYSEDNAGS IVASVNSARE NTRGAREVVS TEMWECLNAM YNAVEERQAY
ARAMGPHAFF AFVEERAAMF AGLADSTMSR DDGWRFLVLG RSVERVDMIV RLLLSRVGDR
ASSPGWVTVL RSAGAHDTYL RTYRGALDAG RVVQFLLLDR LFPRSVFHAL RQAEACLEQL
DHQPTVRVGA RAEALRLLGR ARSDLEFLRP HDLLDDLPRR LAALQTTVRE VGEAVSLQYF
HTAPWVAWTN AEVH