Gene Amir_1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1211 
Symbol 
ID8325388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1353823 
End bp1354740 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content71% 
IMG OID644941756 
Productband 7 protein 
Protein accessionYP_003099009 
Protein GI256375349 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTGA CGACGAGCGA GGTGCAGGCG AGGATGCCGG CTCCGGCGGT GCGCGAGCAC 
GAGCTGACGG GGGTGGGCGG CGCGATCGTG GCCGTGGTGG GCTTCCTGGC CGTGCTCGGT
GGCGCGGGGC TCGTCGCGCT GGGGGTCGCG CAGGCGGCCA ACATCCCGCT GATCCTGGTG
GGGGCCCTGG TCTCGGCGGT CGCCATGGTG GTGCTGGGCG GGCTGTTCAC GGTGGCGCCG
GGCGAGGCGC GCGTGGTCCA GTTCCTCGGC CGCTACACCG GCACGGTGCG CGCCGACGGC
CTGCGCTGGA CGAACCCGTT CACCACGAAG GCGAAGGTCT CCACCAGGAT CCGCAACCAC
GAGACGACCA CGCTGAAGGT CAACGACGCG GACGGCAACC CGATCGAGAT CGCCGCGGTC
GTGGTGTGGC AGGTCGACGA CACCGCGCGG GCGATGTTCG AGGTGGACGA CTTCGTGCAG
TTCGTGGCGA CGCAGACCGA GACCGCCGTC AGGCACATCG CGACCAGCTA CCCGTACGAC
AACCACGACG AGGCCGGGCT GTCGCTGCGG GAGAACGCGG ACGAGATCAC CGAGACCCTG
TCGGTGGAGA TCGCGGCGCG GGTCCAGGCG GCCGGGGTCA AGGTCATCGA GTCGCGGTTG
ACGCACCTGG CGTACGCGCC GGAGATCGCC CAGGCCATGC TCCAGCGGCA GCAGGCGGGC
GCGGTGGTCG CGGCCAGGTC GCGGATCGTG GAGGGCGCCG TGGGCATGGT GCAGCTGGCG
CTGGACCGGC TCGCCGAGGA GGACGTGGTG GAGCTGGACG AGGAGCGGAA GGCGGCGATG
GTGTCGAACC TGCTGGTGGT CCTGTGCGGT GACAAGGCGA CGCAGCCCGT GGTCAACACG
GGGTCGCTGT ACCACTGA
 
Protein sequence
MSVTTSEVQA RMPAPAVREH ELTGVGGAIV AVVGFLAVLG GAGLVALGVA QAANIPLILV 
GALVSAVAMV VLGGLFTVAP GEARVVQFLG RYTGTVRADG LRWTNPFTTK AKVSTRIRNH
ETTTLKVNDA DGNPIEIAAV VVWQVDDTAR AMFEVDDFVQ FVATQTETAV RHIATSYPYD
NHDEAGLSLR ENADEITETL SVEIAARVQA AGVKVIESRL THLAYAPEIA QAMLQRQQAG
AVVAARSRIV EGAVGMVQLA LDRLAEEDVV ELDEERKAAM VSNLLVVLCG DKATQPVVNT
GSLYH