Gene Amir_1155 details

Gene Information

• Locus tag: Amir_1155
• ID: 8325332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 1287190
• End bp: 1287780
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 644941703
• Product: protein of unknown function DUF1234
• Protein accession: YP_003098956
• Protein GI: 256375296
• COG category: [R] General function prediction only
• COG ID: [COG3545] Predicted esterase of the alpha/beta hydrolase fold

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.108938
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCCCTGC CCCACGTCCT GCTGCTGCAC GGCCTCGGAG GTTCCGGGCC CGAGCACTGG 
CAGACGTGGT TGGCGGGGGA ACTGGCGGCG CACGGCGCCC AGGTGGACGT GCCCTCGTTC 
ACCGACCCCG ACGCGCCGGA ACTGGAGGTG TGGCTGGGTG AGCTCCGCGC TCACCTGGCC 
GCGGCCCCCA CCGGCGTGGA GCGGGTCGTC GCCGCGCACT CGTTGGCGTG CCTGCTGTGG 
CTGCACCACG CCGCCACCCT GACCGACCCG GCGCTGCGCG TGGACCGCGT GCTGCTGGTC 
GGCCCGCCCA GCCCGCGCTA CGCGGGCGAG ATCGCGATCC CCGCGCAGTT CCTGGACTGC 
CCGCTGGAGC CGGACGCCCC GCGCGCCGCC TCCGCCGACA CCAGGCTCGT GGTCGGCGAG 
GGCGACCCGT TCTGCAGCCT GGAGCAGGCC AAGGAGCTGG CGGGCGCGCT GAGGCTCGAC 
CTGGACGTCA TCGTGGGCGG CGCGCACCTG AACACGGACG CGGGCTACGG CCCGTGGGGC 
GCGGCGCTGA AGTGGGTCCG CAGCAACCGC ACCCCCCTCA CCCCGCGCTG A 

 

Protein sequence

MSLPHVLLLH GLGGSGPEHW QTWLAGELAA HGAQVDVPSF TDPDAPELEV WLGELRAHLA 
AAPTGVERVV AAHSLACLLW LHHAATLTDP ALRVDRVLLV GPPSPRYAGE IAIPAQFLDC 
PLEPDAPRAA SADTRLVVGE GDPFCSLEQA KELAGALRLD LDVIVGGAHL NTDAGYGPWG 
AALKWVRSNR TPLTPR