Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1132 |
Symbol | |
ID | 8325307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1261967 |
End bp | 1262407 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644941678 |
Product | thioesterase superfamily protein |
Protein accession | YP_003098933 |
Protein GI | 256375273 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGGTGTGT TCGTCACCGG CGTCCGTCCG AGGTGGTCCG ACATGGACGC GTACGGGCAC GTCAACCACG CCAACACGGT CACTCTGCTG GAGGAGGCCC GCGTCGACCT GCTGTTCACC GAGGCCGTCC GGCTGGGGGT CCCCGACCTC CGCGAGGGCG TCGTGGTGGC CAAGCTCGTC GTCGAGTACC TGCAACCGCT GCTGTTCAGC GGCGGCGAGG TGGTCGTGGA GATGTCGGTC CGCGAGCTCA AGTCCGCGTC CTTCACCCTC GACTACGCGG TCAGGGGCAG CCGCAGGCCG GACAGCCCGG TCGTCGCCAG GGCCGAGACC CTGATGGTGC CCTACAACGT CGCGGCGGGC CGCCCCCGCC GACTGTCCGA AGCCGAGCGC GACTTCCTCG CCGGGTGGCG CGCCGGAACG CCCGGAGGTG CCGGTGCCTG A
|
Protein sequence | MGVFVTGVRP RWSDMDAYGH VNHANTVTLL EEARVDLLFT EAVRLGVPDL REGVVVAKLV VEYLQPLLFS GGEVVVEMSV RELKSASFTL DYAVRGSRRP DSPVVARAET LMVPYNVAAG RPRRLSEAER DFLAGWRAGT PGGAGA
|
| |