Gene Amir_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1107 
Symbol 
ID8325281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1229350 
End bp1230756 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content71% 
IMG OID644941653 
Producthypothetical protein 
Protein accessionYP_003098909 
Protein GI256375249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.551011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTAA TCAAGGAACG CAACCGCCTG CTTGAAGCGG TCATGCGCGA CGCGGGCGTC 
AGCAACAAGG GACTGGCGGC ACGGGTCCGC GAGCTGGCCG CGCGCGACGG TGAGACGGTC
GCCGCCGACC ACGTGTCGGT GAAGCGCTGG CTGGACGGCA CCAACCCCAA GCCCGCGACG
CAGCAGTACA TAGCCCTGGC CCTGGGCGGG AAGCTCGGGC GGGAGGTCAC GCCGGAGGAG
ATCGGGTTCA GCGCTGGGCT GGAAGCGGTG GGCCCGGACA CGACGGCCAC GGCCGCGGAG
TACCCCGCCG ACTCCTCAGC CGCCGTGGAC CTGTTGGGCC AGCTCACCGC AGCCGACCTC
GAAGACCAGC CAGGGCTGAC AACGCAAGGG TGGACTCCTG CGGTCACCCC CAAGGTGATC
ACCGGCTACC TGTTCGGCGA CGCCCTCCAA GCCGACGAAG AGATCCGTAC CGGAGCCCCG
GCAGCGGCGG CGATCCGGAC GACCGCAGCG CACCTCATGG ACCTGGACTT CCGGTTCGGC
GGCGGTCACG TGCGCAAGAT GCTGCTGTTC TACTTCAAGT CCGAGATCGC CCCACTCCTG
CGCGCGGACC ACCCGGTGCC GGTAAGGCGC GAGCTGTTCA GCGCGGCCGC CGAGGTAGCG
CAACTGTTGG GCTGGAGCGC CTACGACGCC GGGCGGCAGG CGGCGGCCCA GCGGTACTTC
ACGCAGGGCT TGCGCCTGGC GCGCGAGGCC GGTGACGCGG TGGTGGGCGG GCGGCTGCTG
TCCAACCTCA GCCACCAGGC GAACTACCTG GGCAAGTTCA ACGACGCCAT CCAGCTCGCA
CGAGCCGCCC AGACCGCGAC CCGAGGCGTT GCCACGCCCG CCGTGAACTC GATGTTCCTG
GCGATGGAGG CCAGGGGCCT CGCGGGCAGC GGCGACGCCA AGGAGTTCGC CCGCGTGCTG
GCTGAGGCGG AACGGTCCTT CGGGCAGCAC AGGCCGGAGG ACGAGCCGGA GTGGGCGCGG
TACTTCAACG CCGAGGAGCT GGCCGGGGAA GCCGCCCACT GCTTCCGCGA CCTCGGCAGG
GCCGAGGAGA CCCGCCTGTA CGCGGCCAGG GCGATCGCTC CCGAGGCGAC CCCGCCGAGG
ACGCGCGCGT TCATCGGCAT GGTCACGGCG GCGGGCGCCC TCACCAACGG CGACCTGGAC
GAGGCCGTGA CGCTGGCCCT GGACGCCGTG GACCTGGCCG GACCGCTGCA ATCCAGCAGG
TACGTGCGCT ACCTGACCGA CTTCCACGAG CGTCTGACCG CAGTGTGCCC ACGTCACCCG
CTGGTGCTGC GGTTCGCCGA GGAGATCGTC AAGCAGTACC CGACGCTGCC CCTCGGCTCC
GCCGTGGTGC TCTCGCGGGT GGCCTAG
 
Protein sequence
MAVIKERNRL LEAVMRDAGV SNKGLAARVR ELAARDGETV AADHVSVKRW LDGTNPKPAT 
QQYIALALGG KLGREVTPEE IGFSAGLEAV GPDTTATAAE YPADSSAAVD LLGQLTAADL
EDQPGLTTQG WTPAVTPKVI TGYLFGDALQ ADEEIRTGAP AAAAIRTTAA HLMDLDFRFG
GGHVRKMLLF YFKSEIAPLL RADHPVPVRR ELFSAAAEVA QLLGWSAYDA GRQAAAQRYF
TQGLRLAREA GDAVVGGRLL SNLSHQANYL GKFNDAIQLA RAAQTATRGV ATPAVNSMFL
AMEARGLAGS GDAKEFARVL AEAERSFGQH RPEDEPEWAR YFNAEELAGE AAHCFRDLGR
AEETRLYAAR AIAPEATPPR TRAFIGMVTA AGALTNGDLD EAVTLALDAV DLAGPLQSSR
YVRYLTDFHE RLTAVCPRHP LVLRFAEEIV KQYPTLPLGS AVVLSRVA