Gene Amir_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1103 
Symbol 
ID8325277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp1227118 
End bp1227627 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content67% 
IMG OID644941649 
ProductNUDIX hydrolase 
Protein accessionYP_003098905 
Protein GI256375245 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCTGT TGCCGTACGC CGAGTACGCC GCATCGCTCA ACCGCAAGCG CGCCAGCGCA 
GGCGTGCTGT TTCACGCCCC GGACGGCCGG GTGCTCCTGG CGGAGACGAC CTACAAGAAG 
TCCTGGGAGA TCCCCGGTGG GGCCGTGGAC GCAGGCGAGC CACCGTGGCG CACCGCCCTG 
CGCGAGGTGC ACGAGGAGAT CGGTCTGTCT CTGCCCCTCG GCACCCTGCT GGTGATCGAT 
TACGTGCCGA CCGAAGAACC GATGCCCGAA GGACTGGCGT TTGTTTTCGA CGGCGGCACG 
ATCAGCGATG ATGAAGTGGC AGAACTGGAA CTGACCGATC CCGAAATCCG GTCGGTCGGC 
CTGTTCACCC TGGACGAGGC CCGCCCGTTG ATTGACCCAG TGCTAGCAGG CCGGATCAGC 
GCGGCCCTGC ACGCGATCGC CACCGGGACC CTCGTCTACT GCGAGTCCGG CCACCCGATC 
TCGACAACCG CCACAGCCGA CCCGAGCTGA
 
Protein sequence
MDLLPYAEYA ASLNRKRASA GVLFHAPDGR VLLAETTYKK SWEIPGGAVD AGEPPWRTAL 
REVHEEIGLS LPLGTLLVID YVPTEEPMPE GLAFVFDGGT ISDDEVAELE LTDPEIRSVG 
LFTLDEARPL IDPVLAGRIS AALHAIATGT LVYCESGHPI STTATADPS