| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1038 |
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| Symbol | |
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| ID | 8325210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1148989 |
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| End bp | 1151952 |
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| Gene Length | 2964 bp |
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| Protein Length | 987 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644941582 |
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| Product | glycyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_003098840 |
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| Protein GI | 256375180 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit
[TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit
[TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGACG CGCTGCTCGC GCTGACCAGG TACTGGACCG AACGGGGCTG CGTCGTCGTG
CAGCCCTACA ACACCGAGGT CGGGGCGGGG ACGCTCAACC CCGCCACCGT GCTGCGCGTG
CTCGGTCCCG AGCCGTGGCG GGTGTCCTAC GTGGAGCCCA GCGTGCGGCC CGACGACGCC
CGCTACGGCG AGAACCCCAA CCGGCTCCAG ACCCACACCC AGTTCCAGGT GATCCTCAAG
CCCGACCCCG GCAACCCCCA GGAGCTGTAC CTGGGCAGCC TCGCCGCGCT CGGCATCGAC
GTGCGCGCCC ACGACGTGCG GTTCGTCGAG GACAACTGGG CCTCGCCCGC GCTCGGCGCG
TGGGGCCTGG GCTGGGAGGT GTGGCTGGAC GGCCTGGAGA TCACCCAGTT CACGTACTTC
CAGCAGGCGG GCGGCATGTC GCTCGACCCG GTGTCGGTGG AGATCACCTA CGGCATCGAG
CGGATCATGA TGGCGCTGCA GGGCGTGTCC CACTTCAAGG ACATCGCCTA CGCGCCCGGC
ATCTCCTACG GCGAGGCGTT CGGCCAGGCC GAGTACGAGA TGAGCCGCTA CTACCTGGAC
GACGCGGACG TCGAGGCGAA CAAGCGGCTG TTCGAGGAGT ACGCCTCCGA GGCCAGGCGG
ATGCTGGACG CCCGCCTGCC CGTGCCCGCG CACAACTACG TGCTCAAGTG CTCGCACGCG
TTCAACGTGC TCGACGCGCG CGGCGCGATC AGCACCACGG AGCGGGCGCG CGCGTTCGCC
AGGATGCGCG GGCTGGCCCG CGAGGTGTCG CAGCTGTGGG CGGCCCGCCG CGAGGAGCAG
GGGCACCCGC TGGGCCTGGT CGAGGCGCTG CCCGCCGCGC CCAAGCCGAC CTCCTTCGCC
GACGTCGACG GCGCGCGCAC GCTGCTGTTC GAGATCGGCG CCGAGGAGCT GCCGCCGCAC
GAGGTGACCC GCACCACGCA GGCCGTGCGC GAGGCGGTCG CCGCCAAGCT CGCCGCGACC
AGGCTCGCCG TCGGCGAGGT CGCCGCGCAC GGCACGCCCC GGCGCGTGGT CGTCGTGGTG
CCGGACGTGC AGCCGCGCGA GCCCGACGCC GAGCGCACCG CGCGCGGCCC TCGCGTCTCG
GCCGCGTTCG ACGCCGACGG CAACCCCACC AAGGCCGCGC AGGGCTTCGC GCGCGGGCAG
GGCGTCGACG TGTCCGAGCT GGGCCGCGTG GTCGAGAACG GCGTCGAGCA CGTCGCGCTG
ACCAGGACCG TCGCCGGTCG CGGCGCGGTC GAGGTGCTCA GCGGGGTGCT CGGCGAGGTC
GTGACCGAGC TGCGCGCCGA GAAGAACATG AAGTGGAGCG ACCCGAAGCT GTCGTTCACC
CGCCCCGTGC GCTGGCTGCT CGCCCTGCTC GGCGACACCC CGGTGCCGGT GGTGGCGTCC
GCGCTGGCCT CCGGGACCAC CACGCGGGTG CACCGCACCG CCGACCAGCC GGTGGTGGAG
GTCTCCTCCG CCGACGGCTA CCGGGAGTTC CTGGCGGGCC ACGGCGTGGT GCTGTCCGCC
GACGAGCGGC GCGCCGAGAT CGTCCGCAGG GCGCAGGAGC TGGCCGCGTC GGTCGGCGGC
TCGGTGGACC TGGACGGCGT GCTGGACGAG GTCACCAACC TGGTCGAGCA GCCGACCCCG
ATCCTCGGGT CGTTCAACGC CGACTACCTG GAGCTGCCCG CGCAGATCCT CACCACGGTG
ATGCGCAAGC ACCAGCGGTA CCTGCCGGTG CGCGCCGCCG GAGGCGAGGG CGCGGCAGGC
TCGCTGCTGC CGCACTTCGT CGCCGTCGCC AACGGCGAGG TCGACGAGGA CCTGGTGCGC
GCGGGCAACG AGGCCGTGCT GCGGGCCCGC TACGAGGACG CCGCGTTCTT CTGGCGCGCC
GACCTGCGCA CGCCGCTGGA GACGATGAAG GGCGGGCTGG ACAAGCTCAC CTTCGCCGAC
AAGCTCGGCT CCATGTCCGA CCGCAGCGCC CGCATCGCCG CGCTCGCCGA ACGGCTCGCC
GAGGTCGTCG GCGCGGGCGA CGAGACGCTG CGCCGGGCAG GCGAGCTGGC CAAGTTCGAC
CTCGGCTCGC AGATGGTCAT CGAGCTGTCC AGCCTCGCGG GCACCATGGC CCGCGAGTAC
GCGGTCCGCG CGGGCGAGAC CCCCGAGGTG GCGCAGGCGC TGTACGAGAT GGAGCTGCCC
CGCTCCGCCG GTGACGCGAT GCCCGCGTCC ACGGCGGGCG CGCTGCTCTC CCTCGGCGAC
CGGTTCGACC TGCTCGCGGG CCTGTTCGCC ACCGGGGCCA ACCCGACCGG CAGCTCCGAC
CCGTTCGGCC TGCGCCGGGC CGCGCTCGGC GCGGTGAGCG TGCTGCGGCA CTTCCCCGAG
CTGCGCGCCA TCACCCTGTC CGCGGCGCTG GAGCTGGCCG CGGCCGGCCT GCCCGAGGGC
GTCGCGCTGT CCGCCGAGGC CCTCGAAGGC GCGCGGGAGT TCGCGGTCCG CCGGTACGAG
CAGCAGCTGC TCGACGCCGG GCACGACCAC CGCCACGTCA ACGCCGTGCT CGTGCTGGCC
GACGCGCCCG CCGTCGCGGA CGAGACCCTG GCCGAGCTGA CCGCGCTGGT CGGCGACGAG
GCGTTCACCG CGCTCGTGGC CGCGCTGCAG CGGGTCCGCC GGATCGTGCC CGCGGGCACC
TCGGGCGGCT ACGACCCGAG CGCCCTGCGC GAGCCCGCCG AGCTGGCGCT GCACGAGGCG
CTCGGCTCGG TCAAGCCGGA CGGCGAGGGC CTCGCGGCGT TCGTCGCCGC CGCCACGCCG
CTCACCGGGC CGGTCAACCG GTTCTTCGAC GACGTGCTGG TGATGGCCGA GGAGCCCGAG
CTGCGGGCCG CCCGCCTCGG CCTGCTGGCG ACCATCCGGG ACCTGGCCGC GCCCGTGCTG
GCCTGGCAGG AGCTGCCGTC CTGA
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| Protein sequence | MQDALLALTR YWTERGCVVV QPYNTEVGAG TLNPATVLRV LGPEPWRVSY VEPSVRPDDA
RYGENPNRLQ THTQFQVILK PDPGNPQELY LGSLAALGID VRAHDVRFVE DNWASPALGA
WGLGWEVWLD GLEITQFTYF QQAGGMSLDP VSVEITYGIE RIMMALQGVS HFKDIAYAPG
ISYGEAFGQA EYEMSRYYLD DADVEANKRL FEEYASEARR MLDARLPVPA HNYVLKCSHA
FNVLDARGAI STTERARAFA RMRGLAREVS QLWAARREEQ GHPLGLVEAL PAAPKPTSFA
DVDGARTLLF EIGAEELPPH EVTRTTQAVR EAVAAKLAAT RLAVGEVAAH GTPRRVVVVV
PDVQPREPDA ERTARGPRVS AAFDADGNPT KAAQGFARGQ GVDVSELGRV VENGVEHVAL
TRTVAGRGAV EVLSGVLGEV VTELRAEKNM KWSDPKLSFT RPVRWLLALL GDTPVPVVAS
ALASGTTTRV HRTADQPVVE VSSADGYREF LAGHGVVLSA DERRAEIVRR AQELAASVGG
SVDLDGVLDE VTNLVEQPTP ILGSFNADYL ELPAQILTTV MRKHQRYLPV RAAGGEGAAG
SLLPHFVAVA NGEVDEDLVR AGNEAVLRAR YEDAAFFWRA DLRTPLETMK GGLDKLTFAD
KLGSMSDRSA RIAALAERLA EVVGAGDETL RRAGELAKFD LGSQMVIELS SLAGTMAREY
AVRAGETPEV AQALYEMELP RSAGDAMPAS TAGALLSLGD RFDLLAGLFA TGANPTGSSD
PFGLRRAALG AVSVLRHFPE LRAITLSAAL ELAAAGLPEG VALSAEALEG AREFAVRRYE
QQLLDAGHDH RHVNAVLVLA DAPAVADETL AELTALVGDE AFTALVAALQ RVRRIVPAGT
SGGYDPSALR EPAELALHEA LGSVKPDGEG LAAFVAAATP LTGPVNRFFD DVLVMAEEPE
LRAARLGLLA TIRDLAAPVL AWQELPS
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