Gene Amir_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1030 
Symbol 
ID8325202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp1139765 
End bp1140379 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content74% 
IMG OID644941574 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003098832 
Protein GI256375172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.468417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACAC CGGTGTACAG CGGGGCGACG CGGACTCCGC AGCGGGGCAG ACCCAGGGAC 
GCCAGCCGCG ACGAGGCGCT GCGGCGAGCG GCGCTGGAGG TCATGGCGGA GGTCGGCTAC 
CGGGCGCTGA CGATGGACGC GGTGGCGGCG CGGGCGCGCG CCGGGAAGGC CACGATCTAC 
CGGCGCTGGG AGTCGAAGCT CGACCTGGTC ATCGACACCT GCGCGCAGCT GGCGAGCCAG 
AACCTGGCGC AGCCGGACAC CGGGTCGCTG GAGGGGGACC TGAGGGAGTC GCTGCGCTCG 
TTCGCGGCGT TCCTGTCCGG GCCGATCGGC AAGGCGGCGC AGGCGCTGGT GGGCGAGCTG 
CCGCACGAGC CGGAGCTGGC GGTGGCGTTC CGGGAGACGT TCCTGATCGC GCAGCGCGAG 
GTGCTGCGGC AGGTGCTGGA CCGGGCGCAC GGGCGCGGCG AGCTGCGCGA GGGGGCGCCG 
AGGTCGATGG CCGTCGAGCT GGCGGGCGCC GCGCTGACGT ACCGGCTGAT GCTCACCGGC 
GAACCGCTGG ACGAGGCGTT CGTGGAGCGC GTGGTGGAGC AGGTGCTACT GCCCCTCGTG 
GCCAAGGGGC AGTAG
 
Protein sequence
MATPVYSGAT RTPQRGRPRD ASRDEALRRA ALEVMAEVGY RALTMDAVAA RARAGKATIY 
RRWESKLDLV IDTCAQLASQ NLAQPDTGSL EGDLRESLRS FAAFLSGPIG KAAQALVGEL 
PHEPELAVAF RETFLIAQRE VLRQVLDRAH GRGELREGAP RSMAVELAGA ALTYRLMLTG 
EPLDEAFVER VVEQVLLPLV AKGQ