Gene Amir_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1028 
Symbol 
ID8325199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1138127 
End bp1139095 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content73% 
IMG OID644941571 
Productcobalamin synthesis protein P47K 
Protein accessionYP_003098830 
Protein GI256375170 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.906843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCGGA CGCCGGTGCT CGTGGTCGCA GGGTTCCTCG GCGCGGGCAA GACCACACTG 
CTCAACCACC TCCTGACCGG CGCGCGGGGC ACGAGGGTCG GGGTCGTCGT GAACGACTTC
GGCAGCATCG GCATCGACGC GATGGCCGTC GCGGGGCAGG TCGACTCGAC GGTCTCCCTC
GACGGGGGGT GCCTGTGCTG CGCGGTCGAC GTGAGCGGGC TGGACGAGAT GCTGGGCAAG
CTCGTCGGGC GGGTCGACGT GATCGTCGTG GAGGCCAGCG GGCTGGCCGA GCCGCAGAGC
GTGGTGCGGA TGGTGCTGGC CAGCGAGCAG CCGGGGATCG CGTACGGCGG GCTGGTGCTC
GTGGTCGACG CGGCCGAGTT CCCGGACGAG CCGGACCTGC GGGTCGCGGA CCTGGTGGTG
CTGAACAAGG TCGACCGGGT GGCCGATCAC GGGGCGCTGG TCGCGGCGCT GCGCGAGCGC
AAGCCGGGGG TCGCGGTGGT CGCGGCCGAG CGCGGGCGGG TCGACCCGGC GCTGCTGTTC
GACCCCAGGC CCAGGCAGCG GTACGGGCAG CTGACCCTGG ACGACCTGGT CGCGGAGCTG
GGCGAGGACG ACCACGCGGG TCACGCGCAC CACGCGTGGG GCGCCGTCGA GTTCACCGCC
GAGCGCCCGC TGAACCCGCT CCGCCTGATG GCGTTCCTGT CCGACCGCCC GGCGGGCCTG
TACCGCGCGA AGGGCCACGC GTGGTTCGCC GCGCCGGGCC ACGACCAGCG GTTCGAGCTG
CAGGTGGTCG GCGACTACCT GCGGTTCGAC CGCACCCCGT GGCCGGGCGA ACCGCGCACC
GAGCTGGTCC TGATCGGCGT CGACCTGGAC GCGGACGCGA TCACCACCCG GTTGCGCGCC
TGCGAGGAAC CGGACCCGTC GTCGGTGAAC CCGCAGTCGA TGCTGGAGGT GCTGCGGTAC
CTGGTGTGA
 
Protein sequence
MKRTPVLVVA GFLGAGKTTL LNHLLTGARG TRVGVVVNDF GSIGIDAMAV AGQVDSTVSL 
DGGCLCCAVD VSGLDEMLGK LVGRVDVIVV EASGLAEPQS VVRMVLASEQ PGIAYGGLVL
VVDAAEFPDE PDLRVADLVV LNKVDRVADH GALVAALRER KPGVAVVAAE RGRVDPALLF
DPRPRQRYGQ LTLDDLVAEL GEDDHAGHAH HAWGAVEFTA ERPLNPLRLM AFLSDRPAGL
YRAKGHAWFA APGHDQRFEL QVVGDYLRFD RTPWPGEPRT ELVLIGVDLD ADAITTRLRA
CEEPDPSSVN PQSMLEVLRY LV