| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1003 |
|---|
| Symbol | |
|---|
| ID | 8325174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 1118721 |
|---|
| End bp | 1119290 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644941546 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_003098805 |
|---|
| Protein GI | 256375145 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCAGGG CACTGATCGT GGTGGACGTG CAGAACGACT TCTGCGAGGG GGGATCGCTC
GCGGTGGCGG GCGGCGCGGC GGTGGCCTCG GCCATCAGCG CGCACGTGCG GGGCGGTGGG
TACGACCACG TCGTGGCGAC GCGGGACTAC CACGTCGACC CCGGCGGGCA CTTCAGCGAG
TCGCCGGACT ACGTGGACTC GTGGCCGGTG CACTGCGTGG CCGGGACGGC GGGGGCCTCG
TTCCACCCGG AGCTGGACGT GACCGGGGTG GAGGCGGTGT TCTCCAAGGG CGCGTACGAG
GCGGCGTACT CGGGGTTCGA GGGCGCGGCA GGCGACGGGG CGTCCCTGGT GGACTGGTTG
CGCGAGCGCG GCGTCGAGCG GGTGGACGTG GTGGGGATCG CCACGGACCA CTGCGTGCGG
GCGACGGCGC TGGACGCGGC GGCGGCCGGG TTCGCCACGC GGGTGCTGCT CGGGCTGACC
GCCGGGGTGG CGCGGCCGAC CGTGGACTCG GCGCTGGAGC AGCTGCGGGC CGCCGGGGTC
GAGCTGGACG GGGAGCCCGC GGTCGGCTGA
|
|---|
| Protein sequence | MGRALIVVDV QNDFCEGGSL AVAGGAAVAS AISAHVRGGG YDHVVATRDY HVDPGGHFSE
SPDYVDSWPV HCVAGTAGAS FHPELDVTGV EAVFSKGAYE AAYSGFEGAA GDGASLVDWL
RERGVERVDV VGIATDHCVR ATALDAAAAG FATRVLLGLT AGVARPTVDS ALEQLRAAGV
ELDGEPAVG
|
|---|
| |