Gene Amir_0986 details

Gene Information

• Locus tag: Amir_0986
• ID: 8325157
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 1100537
• End bp: 1101157
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 644941530
• Product: methylthioribulose-1-phosphate dehydratase
• Protein accession: YP_003098789
• Protein GI: 256375129
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
• TIGRFAM ID: [TIGR03328] methylthioribulose-1-phosphate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGCGG GCGCGGCGGA CGTGGAGCTG CGGGCGGCGG GCGCCGCGCT GGCCGCCGAG 
TGCGCGCGCT ACGCGGGCAT GGGCTGGATG CGCGGCACGT CCGGCAACCT GTCGGTCGTC 
CTCGGCCGCG ACCCGCTGCG GCTCGCGGTC ACCACCAGCG GCAAGGACAA GGGCGAGCTG 
ACCGACGACG ACGTGGTGGT CGTCGACGGG CACGGCCGCA CCGACGACCC GGTGAAGGTC 
CCCTCCGCCG AGGCCGGCCT GCACGGGCGG ATCGCCGCCG TGGCGGGCGC GGGCGCGGTC 
GTCCACGTGC ACGCGCTCGC GCCGGTGCTG GCCGCCGAGT TCTGGCCGGA CGGCGTCGAG 
CTGCGCGACC TGGAGATGCT CAAGGGCTTC GGGCGCGCCG ACCACGACGT GGTCACGATC 
CCGGTGGCGC CCAACAGCCA GGACATGGGC GTGCTCGGCG ACGCGTTCGA GGCCGGGTTC 
CGGCCGGACG TGCCCGCGTT GCTCGTGGCC AGGCACGGGG TGTACGCCTG GGGGGCGGAC 
CTGCGCCAGG CCAGGCACCG GCTGGAGTGC CTGGAGTGGC TGCTGCGCTT CAAGGTCGAG 
ACGAGGAGGG ACTCCCGATG A 

 

Protein sequence

MTAGAADVEL RAAGAALAAE CARYAGMGWM RGTSGNLSVV LGRDPLRLAV TTSGKDKGEL 
TDDDVVVVDG HGRTDDPVKV PSAEAGLHGR IAAVAGAGAV VHVHALAPVL AAEFWPDGVE 
LRDLEMLKGF GRADHDVVTI PVAPNSQDMG VLGDAFEAGF RPDVPALLVA RHGVYAWGAD 
LRQARHRLEC LEWLLRFKVE TRRDSR