| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0983 |
|---|
| Symbol | |
|---|
| ID | 8325154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1097714 |
|---|
| End bp | 1098841 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644941527 |
|---|
| Product | Acyl-CoA dehydrogenase type 2 domain protein |
|---|
| Protein accession | YP_003098786 |
|---|
| Protein GI | 256375126 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGACT GGCTGGGCGT GGCCGCCGAC GTGGCCGAGG AGCTGAGGGG CGACGCCGCC
GAGCGCGACC GGCGCGGGGA GGACCCCGTC GCCGAGGTCG CCGCGCTGAA GGACTCCGGG
CTGCTGACCG TCGCCGACTG GGACGCGCAG CGCGCGGTCG TGCGGGTCGT GGGCGCCGCC
GACGCCAACG TCGGGCACCT GCTCGGCTAC CACTACCTCC AGGTGTGGCG GGGCGGGCTG
TTCCTGGACC GGGACGCCGC CGCCGCGCGC TCCGCCGAGC TGCACGGGCA GAACCTGTTC
TGGGCGGGCA TCAGCAACCC GCTCGACGCC GCCCTCCAGC TCACCCCCGT CGACGGCGGC
TACCGGGTCG ACGGCCGCAA GACCTTCGCC ACCGGCGCCG CCGTCGCCGA CCGGCTCGTG
GTCAGCGCGA CCCGCGTCGA CACCGGCGGG AAGCTCACCT TCACCCTGGA CGCCAGGGCC
GAGGGCGTCA GCCGCGCCGG CGAGTGGGAC AACATGGGCC AGCGGCTCAC CGCCAGCGGC
GGCGTGCAGC TCACCGACGT CCTCGTGCCC GAGGCGCAGG TGCTCGGCCC GGCGGACGGC
ACGAGCCCCC GGCTGTCGCT GGCCGCCATC GGGTTCCAGG AGGCGCTCTC CCAGCTGCAC
GTGGCCATCG CCGAGGGCGC GCTCGCCGAA GCCGCCCGGT ACACCCGCGA GACCACCCGG
CCCTGGTTCC TCAGCGGCGT CGACTCGGCC GCCGAGGACC CGTACACCCT GCAGACCTAC
GGGGAGCTGG TCGCCGACGT CCAGGCCGCC GGGCTGCTCG CCGACCGCGC CTCCGCGCTG
CTGCGCGACG CCTCCGAGGC CGGGACCGCG CTCACCGCCG GGCAGCGCGC CGAGACCGCC
GCCGCGATCT CCTCGGCCAA GGTCGTCAGC ACCAGGGTCG TCAACCACAC CACCGCCAAG
GTGTTCGAGC TGTGCGGGGC CCGCGCCACC GCGAGCAAGC ACGCCTTCGA CCGGTTCTGG
CGCAACGCCC GCACCATCAC GCTGCACGAC CCGGTGGCCT ACAAGGCCCG CGAGGTCGGC
GCGCACTTCC TCACCGGCCA GCACGCGCCG TTCACCGGGT ACAGCTAG
|
|---|
| Protein sequence | MRDWLGVAAD VAEELRGDAA ERDRRGEDPV AEVAALKDSG LLTVADWDAQ RAVVRVVGAA
DANVGHLLGY HYLQVWRGGL FLDRDAAAAR SAELHGQNLF WAGISNPLDA ALQLTPVDGG
YRVDGRKTFA TGAAVADRLV VSATRVDTGG KLTFTLDARA EGVSRAGEWD NMGQRLTASG
GVQLTDVLVP EAQVLGPADG TSPRLSLAAI GFQEALSQLH VAIAEGALAE AARYTRETTR
PWFLSGVDSA AEDPYTLQTY GELVADVQAA GLLADRASAL LRDASEAGTA LTAGQRAETA
AAISSAKVVS TRVVNHTTAK VFELCGARAT ASKHAFDRFW RNARTITLHD PVAYKAREVG
AHFLTGQHAP FTGYS
|
|---|
| |