Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0980 |
Symbol | |
ID | 8325151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1094654 |
End bp | 1095991 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644941525 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003098784 |
Protein GI | 256375124 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCAGC ACGAGGCGTT CGGCATCGAG TTGCGCAGGC GCCGGAACGC GGCAGGTCTG TCCCTGCAGG GCCTGGCGAA GGAGCTGAAC TACAGCAAGG GCCACCTGAG CAAGATCGAG ACCGGGGCGA AGGCGCCGAC CCCGCAGCTC GCCCGGCAGG CCGACGCGGT GCTCTCCGCC GGTGGCGAGC TGAGCAGGCT CGCCCCGCAG ACCCCGGTCG GCCACCCGCG CCAGGCCGTG CCCGCCCCGC GCCACGAGGC CCCGCCGCTG CCGAGGGCGC GGCGCAGCGA GCTGGAGGCG GCGACCGAGG ACCCCGCGGT GGCGCAGGGG CTGCGGCTCC AGTTCGACAC CATCCGCGAC CTGGGCAAGC GCATGTCGCC CCGGCTGGTG CAGCCGATGC TGCACGGGTC GCTGGTGTCG CTGCGGGACA TGCTCGCCGC GGCCGGGGAG GCGGGCGCGA AGCGGCGGGT GGCGCTGATG ACGGCGCGGT TCGTCGAGTA CGCGGGCTGG ATGGCGCAGG AGGCAGGCCG GCGGGAGGAG GCGGTGGCGC TGACCCTGGA GTCGGCGGCG CTGGCCGAGC TGGCGGGCGA TCCGGGGCTG GCGGCGTACG CGCTGGTCCG GCGGGCCGAG CTGGCCATGT ACGCGGGCGC GGCGCAGCAG ACCATCGCGC TGGCGGAGCG CGCGCTGGCC GACCCGCACG CGACGGCGCG GGTGCGCGGG CTGGCCGAGC ACCGGTTGGC GCAGGGGTTC GCGCAGCTGG GCGAGGAGGC GCGGTGCCGG GCGGCGCTGG AGCGCGCGGC GGCGCTGCTG GCCGAGGCGG CGGCGCCGGA GCCCGTGCTG CCCGAGGAGA CCCTGGCGCG GGCCACCATG CTCACCCCGC CGGCCGCAGG GCGGGCGGAC GTCCCCGCGA GCGGCTTGGT CGTCGCCCCG GCACGTGGCC CGGCGGCCGG TCGGGGGGTC GCACCGGTGG TCGGCTCGTC CACGGTCGCC GACCTGGACG CGGTCGTGAC CGGCTGGTGC CTCTACGACC TGGGTCGCCC GGCCGAGGCG GCCCGCCTGC TGGAGCGCGG ACTGGCGGGC ACCTCGCCCG AGGCCCGCCG CGCCCGCGCC CTGTACGGGG TCCGCCTGGC GCTGGCCCAC GAGGCGGCGG GCGAGCTGGA CCGGATGCAC GAGGTGGCGC TGGAGTCCCT GGACACGGCG CGGGCGCTGG GCTCGGACAC CGTCCGCAGC CAGCTGCGCA ACCTGGCCTG GATGGTCCAG CGCAGGCACT CCCACCGGCC CTCGCGCGAC CTGCACGTGG AGATCACCGC CGCCCTGCAG GACGGCGTCG TCGACTGA
|
Protein sequence | MTQHEAFGIE LRRRRNAAGL SLQGLAKELN YSKGHLSKIE TGAKAPTPQL ARQADAVLSA GGELSRLAPQ TPVGHPRQAV PAPRHEAPPL PRARRSELEA ATEDPAVAQG LRLQFDTIRD LGKRMSPRLV QPMLHGSLVS LRDMLAAAGE AGAKRRVALM TARFVEYAGW MAQEAGRREE AVALTLESAA LAELAGDPGL AAYALVRRAE LAMYAGAAQQ TIALAERALA DPHATARVRG LAEHRLAQGF AQLGEEARCR AALERAAALL AEAAAPEPVL PEETLARATM LTPPAAGRAD VPASGLVVAP ARGPAAGRGV APVVGSSTVA DLDAVVTGWC LYDLGRPAEA ARLLERGLAG TSPEARRARA LYGVRLALAH EAAGELDRMH EVALESLDTA RALGSDTVRS QLRNLAWMVQ RRHSHRPSRD LHVEITAALQ DGVVD
|
| |