Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0937 |
Symbol | |
ID | 8325103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1040335 |
End bp | 1040862 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644941479 |
Product | protein of unknown function DUF45 |
Protein accession | YP_003098742 |
Protein GI | 256375082 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.397876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGAAC CGCAGGTGGA GGTGCGGCGC AGCGCCCGGC GCCGCCGAAT GGTGAGCGCG TACCGCGAGG GGGACACGGT CGTCGTCCTG CTGCCCGCAC GCATGAGCAA GACCGAGGAG AAGCACTGGG TGGCGGAGAT GCTCAGCCGC CTCCAGCGCA GCGAGACCAA GCGCCGGTCA CCCACTCGGG TGTCCGACGC GGCACTGGCC AACCGCTGCG CCGAGCTGGC GGGCCGCTAC CTGGACGGCC TGGAACCGAC GAGCGTGCGC TGGGTCCCGC CCATGCGCAC GCGCTGGGCG TCGTGCACCC CCAGCGAGGG CACGATCCGC ATCAGCGAAC GCCTGCGCGA CGTGCCCCCG TGGGTGCTCG ACTACGTCCT GGTGCACGAG CTGGCCCACC TGCACGTGCC GGGGCACGGC AAGGACTTCT GGGAACTGGT GCACCGGTAC CCGAGGTCCG AGCGGGCGAT GGGCTACCTG GAAGGCCTGT CCGCCGCCGC CGGCCTCGGG ATCACCGAGG AGGACTGA
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Protein sequence | MPEPQVEVRR SARRRRMVSA YREGDTVVVL LPARMSKTEE KHWVAEMLSR LQRSETKRRS PTRVSDAALA NRCAELAGRY LDGLEPTSVR WVPPMRTRWA SCTPSEGTIR ISERLRDVPP WVLDYVLVHE LAHLHVPGHG KDFWELVHRY PRSERAMGYL EGLSAAAGLG ITEED
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