Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0917 |
Symbol | |
ID | 8325083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1020430 |
End bp | 1021272 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644941460 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003098723 |
Protein GI | 256375063 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTTG ACCCCGATGA CCCGCGACCG CCGTACATCC AGGTGGCGAA CGCTCTGAGG GCAGCCATCC TGACCAAGGT CTTCAAGGCC GGGGACAAGC TCCCCTCCCG CGCCGAGCTG GCGAAGAAGT ACGACGTCGC TCCGATGACG GTGCAGAACG CGCTGCGCGA ACTGCGTGAC GAAGGCTTGA TCGTCTCCAG GCAGGGCAGC GGCGTCTTCG TCCGAGAGCG CACCGAGCGC CCGGTGGGTC TCCGCCCCCA CATCGAACGC GCCTTCGAGT CCGACCACGT GACGATCGAC TTCGCGGGCT TCTCCGGCGA GACCCTGCAC GGCGTCATCC AGGAACCGTT GGACAAGATC CGCATCGGCA GGCTCACGCC GGAGTCGATC CGCGTCCGCA TCCTCGTGCC CGACCCCACG GTTCCGTGGT CGGTGCCCTG CACCGTCGAG GACAAGAGCG ACAGCCCGGC GTTCCGCCGA CGGGCAGCGG AGATAATGCG CCGCCACACG CTCGCCATCG TGGACAACGT GACCGAGCTG GGCAGCTTGG GTTTGGTCAA GGAGGCGACC GCAGAGGTCC GCGTCCACAA CGCCGCCCCG CTGTTCAAGC TCTACCTGAT CAACAACGAC GAAGCCTTCT TCGGCTTCTA CCCGGTGCGC GAGCACGTGC TCTCGCTCGG CGGCGAGCCC CAGGCGATCT ACGACCTGAT GGGCAAGGAC GCGATTCTCT TCCACCACAG CACCACCGAC GACGAAAGCA GCACCGGCAG CCAGTACGTG GAGCAGGCGC GGACGTGGTT CGACAGCCTG TGGGGCACGA TCGCCACGGA GTACCAGCGG TGA
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Protein sequence | MALDPDDPRP PYIQVANALR AAILTKVFKA GDKLPSRAEL AKKYDVAPMT VQNALRELRD EGLIVSRQGS GVFVRERTER PVGLRPHIER AFESDHVTID FAGFSGETLH GVIQEPLDKI RIGRLTPESI RVRILVPDPT VPWSVPCTVE DKSDSPAFRR RAAEIMRRHT LAIVDNVTEL GSLGLVKEAT AEVRVHNAAP LFKLYLINND EAFFGFYPVR EHVLSLGGEP QAIYDLMGKD AILFHHSTTD DESSTGSQYV EQARTWFDSL WGTIATEYQR
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