| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0910 |
|---|
| Symbol | |
|---|
| ID | 8325074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1004181 |
|---|
| End bp | 1008275 |
|---|
| Gene Length | 4095 bp |
|---|
| Protein Length | 1364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644941451 |
|---|
| Product | methyltransferase FkbM family |
|---|
| Protein accession | YP_003098716 |
|---|
| Protein GI | 256375056 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | [TIGR01444] methyltransferase, FkbM family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGGC GACCCGTGCG GGTGGTCCAC ACCGGGCACT CCCCGAAGCT GGGCTCGTAC
ACCGCGACCG AGTTCCCCTC GAACCCGGAG ACCGCGCCCG TCCTGATCGG GTGCACGGTG
GCGACCGCCG CCGAGCTGCC CGCGGTGAAG GCGCTGTCCA GCTCGTTCCT GGCCCACCAC
CCGGAGGCCA GGTTCCTGGC GCTGGTGGTC GACGCCGCGC CGGGCACCTC GGGCCCCGGC
CTGGTCACCC CGGCCGACCT CGGCGTCACC GCCGAGGAGC TGGCGGTGCT CGCCACCGGC
TGCACCGCCG CCGAGCTGTG CGGCGTGCTC CGGCCGCTGC TGCTGGAGCA GCTGCTCGGC
CAGGGCGTGC CGGTGCTGTG CCTCGACCCG TGGGTGCGGG TCCTCGCGCC CGTCACCGAG
CAGGTGCTCG CCGCCGCCGA GCAGGGCCCG CTGGTGCTGC TGCCCAGGTC GCTGCGCCCG
CTGCCCGACG ACGGCCTGCG CCCCACCCCG ACCGAGCTGC TGCGCACCGG CGTGTTCGAC
CCCGGCTTCC TGGTCGTCGC GCCCGGCGCC GAGCCGTTCC TGCGCACCCT CGCCGAGCAG
CTGCGCCGCA CCCCGGACGC GACCAAGGCC GTGCTGGACA TGGCGCCCGC GCTGGTCAAG
GTGCACGTGC TGCGCGACGC CACCATCGGC CTGTCCGCGT GGAACGCCGC CCAGCGCCCC
GTGCACCGGC TCGACGACGG CGCGCTCAGC GTCATGGGCG AGCCGCTGCG CACGGTGCAC
TTCGCGGGCT TCGACCCGAA CCGCCCGTGG CTGCTGTCGG CGCGCTTCGC CGACCGCCCC
AGGGTGCTGC TGTCGGAGCA CCCGCTGCTC GCCGACCTGT GCACCGCCTA CCGGGCCGAC
CTGGTCCGCG CGGGCCACAC CGCCCAGCGC GTCCCGTACG GCTTCGGCCA GCTCGCCGAC
GGCACCCCCA TCCCGGACCG CCTGCGCGCC GACTACCGCG CCGCGTCCCG CACGGGCACC
CCGCACGGCC CGTTCGGCAC CCCGAGGCCG ATCCCGGTGC CACCGCAGGA ACTCCTGCTC
GACGGCGCCC CGGATTTGGC CGACGGGCAG CCGGAATCCG TTCCGCCGCA GGGCGAGCCG
GGCCAGGCCG GACCCGCGCA GGCTGGACCT GCGCAGGACG GGCCGGTGGA GTCCGCAGAC
GCCCCGACCG CCGCTGTTCC CGCCGCCTCG GACACCGACG CGCCGACCAG GGCCGCCCTC
ACCGTCGTCC CCGACGGCGG CGCGCCCGAA GCCGCCACGC CCGATGGCAG TGCGCCCGAA
GGCAGTGCGC CCGAAGACAG CGCGCCCGCC GGGCAGCCCG AGGCCGACGT CCCGGAGTCC
GCTGCCTCTG ACCCCGCCGC GTCCACCGAT CCGACCACCG CCACCGCTGC CGCCTCCGAC
GCCGACGACC GCCCGCACAC CCCGCCCCCC GCGTTCGGGG ACGACCGGGG AGCCGCGTTC
CTGGCCTGGG CCTGCGAACC CGTCCGCGGC CTGCACGGCA GCACCCGCTG GTCCGTCGCC
CTCTGGCAGG GCGACCTCGC CCTGCGCCAC GAGTTCCCCG ACCCGTTCGG CGAGGACAGC
GCCGCCTTCC GCGACTGGTG CGCCACCACC GGCGTCGCCT CCGGCAGGCT CCCCGTCCCC
GCCGTGCCCG GCCCTCGCGC CGGGACCCCC GCCCTCATCG ACCAGCTCGG CGTCACCGTC
CTCGGCGACG ACCCGGCGGC CGACCTGCTC CGCGCCGCCG CCAAGGCCTC CGGCCTGCCC
ACCGGCGACG GCTACCCGGT CGTGCTGCGC GTCGGCGACG AGCCCGTGCC CGCCGACCGC
TTCCTGGTCG ACTACCTCGC GTCCGACCAG CCTCCCCAGT CGCTCGACGC CACCGAGCTG
TGGACGCCCT CCGAGGCCAC CCGCGCCGCC GTCGAGCGCG CGGGCGGACC GGTCGTGCGC
GTCCTCCCGC TGCCCACGGC CGAGGCCGAC GCGGGCGTCC CCGAACCGCA CGAGGGCCTG
CTCCTCGGCG CGCTCGCGGA CCACTCGATC GACCGGTCCG GCAACGTCCT CGGCGTCGTC
GCCGCGTTCC TCGCCGCCTT CCCCGACCGC GACGACGTGC GCCTGCGCAT CACCGTCACC
GGGGCCGACG AGCACCCGGA GGCCGCCGAG CGGCTGCGCC TGGCCACCGC CACCGACCCG
CGCGTCGAGC TGGCCGACGA CTTCCGGCCC GTGGACTGCC TCGTCTCGCT GCACCGGGGC
GGGGCCGACG ACCGCGTCGC CGCCGCGCTG GCGGACGTCG CCGCCACCGG CACCCCGGTC
ATGACCGCGC GGCACGGGGC CGTCCCCGAG CTGTTCGACA AGGCCACCGC GCTGTTCGTG
CCGTGCCGCC AGGGCGTCGA ACCGGACGCC GACGCGGCCG TGAAGCTGCT GCGCGCGATC
GCCGACGAGC CCGAGGCGGT CGCCGCGATA GGGGCCGCCG GGCGCGAGCA CGTGCGCGCC
ACCCGCTCCA CCGCCCAGGT CGCCGAGGTG CTGCGCGAGC GCGTCGAGCA CGCCTACCGG
GGGTGGCGCG CCCGCCGCGC CGCCGCGAAG CCCGCGCCCG TCGCCGACCC GCTCCAGGTG
CTCCAGACCG CCAAGCACGC GCTGCTGCGC GAGCCGGACG TCAGCGTCGC CAGCCGCATC
CCGATGGCCC CGCAGCTGCG CAAGGTCGTG CTGCGCGTGC TCGACCACCA CGACAACCAC
ATGCGCGACG TCCTCGGCGG CATGGTCGAC GGCGTCGAGC GCACCGTGGC CGAGCTGGTC
CGCAGGCAGG ACGAGGTCAC CACCGGCATC GGCCTCGGCG AGCTGGAGGT GCTGCGCTCC
GAGGTGGAGC AGCAGGCCGA GCGCCAGGGC GAGCACTCCG ACCAGCTGAT CGCGCTCGAC
GACTCGGTCG TGCGCGTGCG CGCGGACATG GCCGGGCAGG GCAGGAGGCT GCGCGACATC
GAGGACGCCC TGGTCGCCGA GGCGGCCAAG CGCGCCAAGC AGGGCGAGGC CGCCGCGCAG
CGCATCGACA AGCTCGCCGT CGCGCTGGAG CGCACCCTCG ACCGGATCGA CCGCCTGGAG
TCCAGGGTGG TCGACGTGCT GCGCGACCGG GACCACCGGC TCGACGCCGG GGTGCGCTCG
GCCGCCCAGG CGCAGGCCAC CGCCGACGCG CTGCGCCGGG TCGTGGTGCG CGAGCACGAG
CGGCACTCGG CGTCCGCGCC GTCCGTGCGC AGCTCGCTGG TGCTGACCGA GGTCGGCCTG
CTCCGGCTGC CCGCCGACGA CGCGTTCATG CTCCCGTTCC TGTCCAGCAA CGGGACGTGG
GAGGCGGAGC TGTCCGAGCT GATCGACTCG GTGGTCGAGC CGGACGGGAT CTTCCTGGAC
GTCGGCGCGT ACGCCGGCTA CCAGACCGTG CGGATGCTCA GCCGGATGGG CACGACCGGG
GCCGTCGTCG CGGTGGAGCC GTGCCCGTCG GCGGTGGAGC TGCTGCGGCA CAACGTGCAG
GTGAACCTGC CGCAGCGGGT CGCCGAGCGG CTCGTCGTGG TGCCCGCCGC CGCGTGGGAG
AGCGCGGGCG AGCTGGCCGC GCAGCCCTCG CTCACCGGCG GGGTCTCGGT GTCGCCGCTG
CCTCCGGACG CGCCCGCGGA CGCGCCGAGG GTGCGCGCGA CCCGGCTCGA CAAGGAGCTG
GAGGCCGTTC CCGGTCTCGC GGGGCTGAAG CTGTCGGTCG TCCGCGTGGA CGCGCCCGGC
CGGGGGCACC GCGCCCTCGC CGGGCTGGTG CGGTTGCTGC GCAGGGACCG GCCGCACGTG
TTCCTGGAGT TCTCGGCCAC CGCCACCGAG GCGCTGGGCG ACGACCCGGT GCGCGTGCTG
GCGGAGTTCC GGGTGTGGGG CTACGACCTG GTGCCGGTGG CGACCCGCGA ACCCGCGGCG
CCCGAAGCCG TGGTCGCCGC GATGGAGGGG CTGCGTTCGG TCCCGCTGTG GCTGCGCCCG
CGTCCCGTTC CGGCGAAGGG CGTGCCCCCG CAGGCCGCCC CGACCGCTTC GCAGCGCGCT
GACCAGGCGA TTTGA
|
|---|
| Protein sequence | MKRRPVRVVH TGHSPKLGSY TATEFPSNPE TAPVLIGCTV ATAAELPAVK ALSSSFLAHH
PEARFLALVV DAAPGTSGPG LVTPADLGVT AEELAVLATG CTAAELCGVL RPLLLEQLLG
QGVPVLCLDP WVRVLAPVTE QVLAAAEQGP LVLLPRSLRP LPDDGLRPTP TELLRTGVFD
PGFLVVAPGA EPFLRTLAEQ LRRTPDATKA VLDMAPALVK VHVLRDATIG LSAWNAAQRP
VHRLDDGALS VMGEPLRTVH FAGFDPNRPW LLSARFADRP RVLLSEHPLL ADLCTAYRAD
LVRAGHTAQR VPYGFGQLAD GTPIPDRLRA DYRAASRTGT PHGPFGTPRP IPVPPQELLL
DGAPDLADGQ PESVPPQGEP GQAGPAQAGP AQDGPVESAD APTAAVPAAS DTDAPTRAAL
TVVPDGGAPE AATPDGSAPE GSAPEDSAPA GQPEADVPES AASDPAASTD PTTATAAASD
ADDRPHTPPP AFGDDRGAAF LAWACEPVRG LHGSTRWSVA LWQGDLALRH EFPDPFGEDS
AAFRDWCATT GVASGRLPVP AVPGPRAGTP ALIDQLGVTV LGDDPAADLL RAAAKASGLP
TGDGYPVVLR VGDEPVPADR FLVDYLASDQ PPQSLDATEL WTPSEATRAA VERAGGPVVR
VLPLPTAEAD AGVPEPHEGL LLGALADHSI DRSGNVLGVV AAFLAAFPDR DDVRLRITVT
GADEHPEAAE RLRLATATDP RVELADDFRP VDCLVSLHRG GADDRVAAAL ADVAATGTPV
MTARHGAVPE LFDKATALFV PCRQGVEPDA DAAVKLLRAI ADEPEAVAAI GAAGREHVRA
TRSTAQVAEV LRERVEHAYR GWRARRAAAK PAPVADPLQV LQTAKHALLR EPDVSVASRI
PMAPQLRKVV LRVLDHHDNH MRDVLGGMVD GVERTVAELV RRQDEVTTGI GLGELEVLRS
EVEQQAERQG EHSDQLIALD DSVVRVRADM AGQGRRLRDI EDALVAEAAK RAKQGEAAAQ
RIDKLAVALE RTLDRIDRLE SRVVDVLRDR DHRLDAGVRS AAQAQATADA LRRVVVREHE
RHSASAPSVR SSLVLTEVGL LRLPADDAFM LPFLSSNGTW EAELSELIDS VVEPDGIFLD
VGAYAGYQTV RMLSRMGTTG AVVAVEPCPS AVELLRHNVQ VNLPQRVAER LVVVPAAAWE
SAGELAAQPS LTGGVSVSPL PPDAPADAPR VRATRLDKEL EAVPGLAGLK LSVVRVDAPG
RGHRALAGLV RLLRRDRPHV FLEFSATATE ALGDDPVRVL AEFRVWGYDL VPVATREPAA
PEAVVAAMEG LRSVPLWLRP RPVPAKGVPP QAAPTASQRA DQAI
|
|---|
| |