| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0807 |
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| Symbol | |
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| ID | 8324970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 885780 |
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| End bp | 887042 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644941349 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003098614 |
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| Protein GI | 256374954 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATGA GGGGCGCGAC ACCGCGTCGT CGGCTTGCCG CCGCGGGGGG AGTCGCCGCG
CTGGCGGCCT CCGTGCTGGC GGGTTGCGGT TCGGACGGCG GAGGGCTCGT CGTCAACGTG
TACAAGTACC CGCAGGAGAG CTTCCAGCAG ATCGTCGACC GCTGCAACGC GGAAGCCGAC
GGGTACGAGA TCGTCTACCA CAAGCTGCCC CGCGAGGCCG ACGGCCAGCG CGAGCAGCTG
GTGCGCAGGC TCGCCGCGGG CGACACCGGC ATGGACGTGC TCGGCCTGGA CGTCACCTGG
ACCGCCGAGC TCGCCGAGGC GGGCTGGATC AGGGAGTTCA CCGGGCAGGC CAAGAGCGCC
GTCGAGGACG GCACGCTGGA GACGCCGCTG GAGACCGCCC GCTACCAGGG CAAGCTCTAC
GCCGCGCCGG ACAACACGAA CGTCCAGCTG CTCTGGTACC GGGACGACCT CGTGCCGACC
CCGCCCACCA CGTGGGCCGA GATGATGGAG ATGGGCGCCA AGCTCAAGGC CGAGGGCAAG
CCCGGTCTCG TGCAGGCCAC CGGCAAGCAG TACGAGGGCC TCGTCGTCCT CTACAACACG
CTGGTCAACT CCGCGGGCGG CGCGATCGTC GACGAGTCCG GCACCAAGGC CGTCGTGGAC
GACAACGCGG TGAAGGCGCT GGAGGTCCTC AAGGAGTTCG CCACCTCCGA GGTGGTCGAC
CCGTCGTTCT CCAACGCGGC CGAGGACCAG GCGCGCCTGG CCATGGAGGA GGGCAAGGCG
GCCTTCCAGC TGAACTGGCC GTTCGTCTAC GCCGCCGCGC AGAAGCGCCC GGAGCTGGCC
CCGCACTTCA AGTGGGCCCC GTACCCGGCG ATCGACGAGG GCACCCCGTC CAAGGTGACC
GTCGGCGGCA TCAACTACGC CGTCAGCTCC TACAGCGAGC ACCCGGACGA GTCGTTCGAC
GCGATCAGCT GCCTGCGCAA CGCGGAGAAC CAGAAGTTCG CCGCCATCAA CGACGGCGTC
CCGCCGACCA TCGAGTCGAT CTACTCCGAC CCGGAGATGG CGGAGCCGTA CCCGATGAAG
GAAGCCATCC TGGAGACGCT CAAGACCGCG AGCATCCGGC CGAGCACCCC GGCGTACCAG
AACGTCTCCA CGGTCATCTC CACGATCCTG TCGCCGCCCG CGGGCATCGA CCCGAAGGCC
ACCGCCGAGC GGCTGAAGTC CGAGCTGCAG GACGCGCTCG ACTCGAAGGG GGTCCTGCCG
TGA
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| Protein sequence | MGMRGATPRR RLAAAGGVAA LAASVLAGCG SDGGGLVVNV YKYPQESFQQ IVDRCNAEAD
GYEIVYHKLP READGQREQL VRRLAAGDTG MDVLGLDVTW TAELAEAGWI REFTGQAKSA
VEDGTLETPL ETARYQGKLY AAPDNTNVQL LWYRDDLVPT PPTTWAEMME MGAKLKAEGK
PGLVQATGKQ YEGLVVLYNT LVNSAGGAIV DESGTKAVVD DNAVKALEVL KEFATSEVVD
PSFSNAAEDQ ARLAMEEGKA AFQLNWPFVY AAAQKRPELA PHFKWAPYPA IDEGTPSKVT
VGGINYAVSS YSEHPDESFD AISCLRNAEN QKFAAINDGV PPTIESIYSD PEMAEPYPMK
EAILETLKTA SIRPSTPAYQ NVSTVISTIL SPPAGIDPKA TAERLKSELQ DALDSKGVLP
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