Gene Amir_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0807 
Symbol 
ID8324970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp885780 
End bp887042 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content70% 
IMG OID644941349 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003098614 
Protein GI256374954 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGATGA GGGGCGCGAC ACCGCGTCGT CGGCTTGCCG CCGCGGGGGG AGTCGCCGCG 
CTGGCGGCCT CCGTGCTGGC GGGTTGCGGT TCGGACGGCG GAGGGCTCGT CGTCAACGTG
TACAAGTACC CGCAGGAGAG CTTCCAGCAG ATCGTCGACC GCTGCAACGC GGAAGCCGAC
GGGTACGAGA TCGTCTACCA CAAGCTGCCC CGCGAGGCCG ACGGCCAGCG CGAGCAGCTG
GTGCGCAGGC TCGCCGCGGG CGACACCGGC ATGGACGTGC TCGGCCTGGA CGTCACCTGG
ACCGCCGAGC TCGCCGAGGC GGGCTGGATC AGGGAGTTCA CCGGGCAGGC CAAGAGCGCC
GTCGAGGACG GCACGCTGGA GACGCCGCTG GAGACCGCCC GCTACCAGGG CAAGCTCTAC
GCCGCGCCGG ACAACACGAA CGTCCAGCTG CTCTGGTACC GGGACGACCT CGTGCCGACC
CCGCCCACCA CGTGGGCCGA GATGATGGAG ATGGGCGCCA AGCTCAAGGC CGAGGGCAAG
CCCGGTCTCG TGCAGGCCAC CGGCAAGCAG TACGAGGGCC TCGTCGTCCT CTACAACACG
CTGGTCAACT CCGCGGGCGG CGCGATCGTC GACGAGTCCG GCACCAAGGC CGTCGTGGAC
GACAACGCGG TGAAGGCGCT GGAGGTCCTC AAGGAGTTCG CCACCTCCGA GGTGGTCGAC
CCGTCGTTCT CCAACGCGGC CGAGGACCAG GCGCGCCTGG CCATGGAGGA GGGCAAGGCG
GCCTTCCAGC TGAACTGGCC GTTCGTCTAC GCCGCCGCGC AGAAGCGCCC GGAGCTGGCC
CCGCACTTCA AGTGGGCCCC GTACCCGGCG ATCGACGAGG GCACCCCGTC CAAGGTGACC
GTCGGCGGCA TCAACTACGC CGTCAGCTCC TACAGCGAGC ACCCGGACGA GTCGTTCGAC
GCGATCAGCT GCCTGCGCAA CGCGGAGAAC CAGAAGTTCG CCGCCATCAA CGACGGCGTC
CCGCCGACCA TCGAGTCGAT CTACTCCGAC CCGGAGATGG CGGAGCCGTA CCCGATGAAG
GAAGCCATCC TGGAGACGCT CAAGACCGCG AGCATCCGGC CGAGCACCCC GGCGTACCAG
AACGTCTCCA CGGTCATCTC CACGATCCTG TCGCCGCCCG CGGGCATCGA CCCGAAGGCC
ACCGCCGAGC GGCTGAAGTC CGAGCTGCAG GACGCGCTCG ACTCGAAGGG GGTCCTGCCG
TGA
 
Protein sequence
MGMRGATPRR RLAAAGGVAA LAASVLAGCG SDGGGLVVNV YKYPQESFQQ IVDRCNAEAD 
GYEIVYHKLP READGQREQL VRRLAAGDTG MDVLGLDVTW TAELAEAGWI REFTGQAKSA
VEDGTLETPL ETARYQGKLY AAPDNTNVQL LWYRDDLVPT PPTTWAEMME MGAKLKAEGK
PGLVQATGKQ YEGLVVLYNT LVNSAGGAIV DESGTKAVVD DNAVKALEVL KEFATSEVVD
PSFSNAAEDQ ARLAMEEGKA AFQLNWPFVY AAAQKRPELA PHFKWAPYPA IDEGTPSKVT
VGGINYAVSS YSEHPDESFD AISCLRNAEN QKFAAINDGV PPTIESIYSD PEMAEPYPMK
EAILETLKTA SIRPSTPAYQ NVSTVISTIL SPPAGIDPKA TAERLKSELQ DALDSKGVLP