| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0798 |
|---|
| Symbol | |
|---|
| ID | 8324961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 878054 |
|---|
| End bp | 878443 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644941340 |
|---|
| Product | sec-independent translocase |
|---|
| Protein accession | YP_003098605 |
|---|
| Protein GI | 256374945 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1826] Sec-independent protein secretion pathway components |
|---|
| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.612385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGAGA ACGTCGGATT CAGCGAGCTG CTGGTGCTGG TGCTGGCCGG CCTGTTCATC
CTGGGCCCGG AGCGGCTGCC GGACGCCGCC GCCTGGCTGG GGCGGACCAT CCGCCAGGTC
AAGGAGTACG CGACCGGCGC GCGCGAGCAG CTCAAGAACG AGATGGGCCC GGAGTTCGAG
CAGATCCGCA AGCCGCTGGA GGACCTGCGG GAGCTGCGGA ACTTCAACCC CAAGCAGGCC
ATCACCAAGC ACCTGTGGGA CGACCAGCCC GACGAGAAGC CGAACGGCCA CCCGTCGACC
GGCTACCCGC CCGTCCCCAC CGAGCAGGCC CCGCCGCAGC GGCCCCTCGC GCACAACGAG
CGCCCGCCGT ACGACCCGGA CGCGACCTGA
|
|---|
| Protein sequence | MFENVGFSEL LVLVLAGLFI LGPERLPDAA AWLGRTIRQV KEYATGAREQ LKNEMGPEFE
QIRKPLEDLR ELRNFNPKQA ITKHLWDDQP DEKPNGHPST GYPPVPTEQA PPQRPLAHNE
RPPYDPDAT
|
|---|
| |