Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0645 |
Symbol | ksgA |
ID | 8324806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 710778 |
End bp | 711674 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644941187 |
Product | dimethyladenosine transferase |
Protein accession | YP_003098454 |
Protein GI | 256374794 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGAAG CCCCCACCGG CACCCCGCAG AGCGACCCCG GCGCGGCTTC GGCGCTGCTG GGCCCGGCGG ACGTGCGCAG GCTCGCCGCC GAGCTGGACG TCCGGCCGAC CAAGAAGCTC GGCCAGAACT TCGTGCACGA CCCCAACACC GTCCGCAAGA TCGTCGCCGC CGCGAACCTG CGCCCCGACG ACGTGGTGCT GGAGGTCGGC CCCGGCCTCG GCTCGCTCAC CCTCGCGCTG CTCCCGGCCT GCGCGGACCT CGTCGCCGTC GAGATCGACC CGGTGCTCGC CGCGCGCCTG CCGACCACCG CCGCCGAGCG CGCCCCGTCG CTGGCGGCGA ACCTGTCGGT GGTCACCGCC GACGCGATGC GCGTCACCGC CGCGCAGCTC CCGCACGCGC CGACCGCGCT CGTCGCGAAC CTGCCGTACA ACGTCGCCGT GCCCGTCGTG CTGCACCTGC TCGCCGAGCT GCCGTCGTTG CGCACCGGTC TCGTGATGGT GCAGTCCGAA GTCGCCGACC GGATGGCCGC AGGCCCCGGA TCGAAGGTCT ACGGCGTGCC CAGCGTCAAG CTCGCCTGGT ACGCCGACGC CCGCCGCGCC GGTCCCGTCG GGCGCTCGGT GTTCTGGCCC GTGCCCAACG TGGACTCCGC CCTGGTCGGC TTCACCCGCC GCGACGCCCC GCTGTCCGAC GTGCCGCGCG AGGTGCTGTT CCCGCTGGTC GACGCCGCTT TCGCGCAGCG CCGCAAGACC TTGCGCGCCG CCCTGTCCGG CTGGGCGGGC TCCGCCGCCG AGGCCGAGCG CAGGCTCGTC GCCGCGGGCG TCGACCCGTC CGCCAGGGGC GAGCAGCTGT CCGTCGCGGA CTTCGTCCGG ATCGCCGAGG TCCCGGCCCG TCACTGA
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Protein sequence | MSEAPTGTPQ SDPGAASALL GPADVRRLAA ELDVRPTKKL GQNFVHDPNT VRKIVAAANL RPDDVVLEVG PGLGSLTLAL LPACADLVAV EIDPVLAARL PTTAAERAPS LAANLSVVTA DAMRVTAAQL PHAPTALVAN LPYNVAVPVV LHLLAELPSL RTGLVMVQSE VADRMAAGPG SKVYGVPSVK LAWYADARRA GPVGRSVFWP VPNVDSALVG FTRRDAPLSD VPREVLFPLV DAAFAQRRKT LRAALSGWAG SAAEAERRLV AAGVDPSARG EQLSVADFVR IAEVPARH
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