Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0643 |
Symbol | |
ID | 8324804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 708124 |
End bp | 708894 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644941185 |
Product | hydrolase, TatD family |
Protein accession | YP_003098452 |
Protein GI | 256374792 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCGACG CCCACACCCA CCTGGACGCC TGCGGCGCGA AGACCGCCGA GGACGTCCGG GCGATGCTGG ACCGGGCCGA GGCGGCCGGC GTGAGCCGCG TCGTCACGGT CGCCGACGAC CTCGCCGCCG CCCGCTGGGC CGCCGAGGCG GCCACCTGGG ACGACCGGGT CTACGCGGCG GTGGCGCTGC ACCCGACCCG CACGTCCGAC TTCTCGGACG CGGACCGGGC CGAGCTGGCG GAGCTGGCCG CACGACCGCG CGTGGTCGCG GTCGGCGAGA CCGGCCTGGA CTACTACTGG GACTACGCGC CGCGCGACGC CCAGCAGGAG GCGTTCCGCT GGCACATCGA GCTGGCCAAG CGGGTCGGCA AGCCGCTGAT GATCCACGAC CGGGACGCGC ACGCCGACGT CCTGGCCGCG CTGGACGCCG AGGGCGCCCC GGAGAAGGTG GTGTTCCACT GCTTCTCCGG TGACCTCGAC TTCGCGCGCG CGTGCGTGGA GCGCGGGTTC GTCCTGTCCT TCGCGGGCCC GGTGACCTTC CGCAACTCCT CGGCGCTGCG CGAGGCGGCG GCCTGGGTGC CCTCGGGGCA GCTGCTCGTG GAGACGGACG CGCCGTTCCT CACCCCGCAC CCCTTCAGGG GGCGGCCGAA CGAGCCCTAC TGCGTCAACT ACACACTGCG CGAGCTAGCC ACTCTGCGTC ACGTGGAATT GATCATCCTC GCCAATGAAG TCACTCGAAC CGCCGAAAAT GTTTTCGGAA TAGGGGCCTG A
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Protein sequence | MVDAHTHLDA CGAKTAEDVR AMLDRAEAAG VSRVVTVADD LAAARWAAEA ATWDDRVYAA VALHPTRTSD FSDADRAELA ELAARPRVVA VGETGLDYYW DYAPRDAQQE AFRWHIELAK RVGKPLMIHD RDAHADVLAA LDAEGAPEKV VFHCFSGDLD FARACVERGF VLSFAGPVTF RNSSALREAA AWVPSGQLLV ETDAPFLTPH PFRGRPNEPY CVNYTLRELA TLRHVELIIL ANEVTRTAEN VFGIGA
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