Gene Amir_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0643 
Symbol 
ID8324804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp708124 
End bp708894 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID644941185 
Producthydrolase, TatD family 
Protein accessionYP_003098452 
Protein GI256374792 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGACG CCCACACCCA CCTGGACGCC TGCGGCGCGA AGACCGCCGA GGACGTCCGG 
GCGATGCTGG ACCGGGCCGA GGCGGCCGGC GTGAGCCGCG TCGTCACGGT CGCCGACGAC
CTCGCCGCCG CCCGCTGGGC CGCCGAGGCG GCCACCTGGG ACGACCGGGT CTACGCGGCG
GTGGCGCTGC ACCCGACCCG CACGTCCGAC TTCTCGGACG CGGACCGGGC CGAGCTGGCG
GAGCTGGCCG CACGACCGCG CGTGGTCGCG GTCGGCGAGA CCGGCCTGGA CTACTACTGG
GACTACGCGC CGCGCGACGC CCAGCAGGAG GCGTTCCGCT GGCACATCGA GCTGGCCAAG
CGGGTCGGCA AGCCGCTGAT GATCCACGAC CGGGACGCGC ACGCCGACGT CCTGGCCGCG
CTGGACGCCG AGGGCGCCCC GGAGAAGGTG GTGTTCCACT GCTTCTCCGG TGACCTCGAC
TTCGCGCGCG CGTGCGTGGA GCGCGGGTTC GTCCTGTCCT TCGCGGGCCC GGTGACCTTC
CGCAACTCCT CGGCGCTGCG CGAGGCGGCG GCCTGGGTGC CCTCGGGGCA GCTGCTCGTG
GAGACGGACG CGCCGTTCCT CACCCCGCAC CCCTTCAGGG GGCGGCCGAA CGAGCCCTAC
TGCGTCAACT ACACACTGCG CGAGCTAGCC ACTCTGCGTC ACGTGGAATT GATCATCCTC
GCCAATGAAG TCACTCGAAC CGCCGAAAAT GTTTTCGGAA TAGGGGCCTG A
 
Protein sequence
MVDAHTHLDA CGAKTAEDVR AMLDRAEAAG VSRVVTVADD LAAARWAAEA ATWDDRVYAA 
VALHPTRTSD FSDADRAELA ELAARPRVVA VGETGLDYYW DYAPRDAQQE AFRWHIELAK
RVGKPLMIHD RDAHADVLAA LDAEGAPEKV VFHCFSGDLD FARACVERGF VLSFAGPVTF
RNSSALREAA AWVPSGQLLV ETDAPFLTPH PFRGRPNEPY CVNYTLRELA TLRHVELIIL
ANEVTRTAEN VFGIGA