Gene Amir_0625 details

Gene Information

• Locus tag: Amir_0625
• ID: 8324785
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 689131
• End bp: 689706
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 644941166
• Product: SAF domain protein
• Protein accession: YP_003098434
• Protein GI: 256374774
• TIGRFAM ID: [TIGR03177] Flp pilus assembly protein CpaB

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCTCG CCCGAAAGCT GTTCGCGCTG GCACTGGCCC TGCTCGGCCT GGGAGCGCTG 
CTGTGGCCCG ACCCTGCGAC CACCACCGTG CTGGTGGCCG CCCGCGACCT GCCGCCCGGT 
GTCGCGCTGG CGCGGGAGGA CGTCCGGGCA GTCGAGCTGC CACCGGGGGT GGCGCCGGAG 
GGCGTGGTGG CGGCGGAGGT CGCGGTGGGG CGCGCCTTGG TGTCGACGGC GCGGGCGGGT 
GAGCCGCTGA CGGACGCGCG GCTGACGGGG GTCGACCCGG AGGCGGCGTC GGTGGCGGTG 
CGCTTCGACC CGGTGACGGC CGGGCTGCTG CGCACGGGCA GCCGGGTGGA CGTGGTCGGG 
GTGGGCAGGT TGGGTTCGAC CGGGCTGGAT CCGATCGGGC TGGGGTCGAC CGGGCTGAGC 
CCGCCTGGTC CGGAGGCGCG GGTGCTCGCG CAGGACGCGG TGGTGGTGGC GCTGCGGGAG 
GAGTCCGTGG TCCTGCTGAT GCCGCGCGAC CTGGCAGCGG CGGTGGCGGC CGAGGCGCTG 
GGGCAGGAGG TGGGCCTGAC GCTGCGCTCG AACTGA 

 

Protein sequence

MNLARKLFAL ALALLGLGAL LWPDPATTTV LVAARDLPPG VALAREDVRA VELPPGVAPE 
GVVAAEVAVG RALVSTARAG EPLTDARLTG VDPEAASVAV RFDPVTAGLL RTGSRVDVVG 
VGRLGSTGLD PIGLGSTGLS PPGPEARVLA QDAVVVALRE ESVVLLMPRD LAAAVAAEAL 
GQEVGLTLRS N