Gene Amir_0595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0595 
Symbol 
ID8324754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp657388 
End bp659277 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content61% 
IMG OID644941136 
Producthypothetical protein 
Protein accessionYP_003098405 
Protein GI256374745 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGCCC GCGTGACCAG CGATGACAGC AATTACCGGA TCGTCACCCC CGCGCTGACA 
GTCAAGGCAA TGCGTGACAG CGGCTACAAG AACACCGCCT ACGCGCTCGC CGAGCTGATC
GACAACAGTA TTGATGCTGG CGCCACGCTG GTGGAGGTCT TCGCCTGCGA AAGTCCCGTA
CAGGTCTCCT CCCGCACAAG GCAGCGAGTC GAGACCATCG CTGTGCTCGA CAACGGCAAG
GGCATGGACT CCGAGACACT GCGTCGTGCC CTCAAGTATG GCGACGGCCT CGGCGACGAT
CGTAAGCGCA TCGGCCGATT CGGCATGGGC TTGCCGAACT CCAGCATGTC GCAGTGCACC
AGGGTTGAGG TCTGGTCTTG GACCAACGGT CCTGGAAACG CCCTCTACAC CTACCTCGAC
CTTGCAGAGA TCAACGACGG CCGTGACGCC GTGCCCGACC CGATCCACGT TCAGGGTGGC
GTTCCGGAGT ACTGGCGCGA TCTCAGCGAC GGTCTTCTCA GCGACACCGG AACCCTTGTT
GTGTGGAGGA ACCTCGATCG GGTCAACTGG TACGGCGCTG CGGCAACCCT GAAGAACACG
TCGGAACTCA TCGGTCGCGT CTACCGGCAC TTCCTCCACG AAGACAAGGT CGACATCCGG
ATGGCCCCCG TGCGAGACGG CGAGGTGGTA GCCGGCGCCT ACTACGCCGC GCCCAATGAC
CCTCTCTATC TGATGAAGTC GACCTGCGCG CCGACGCCGT TCGACGACAA GCCCATGTTC
GAGCCGTTCA ACATGGGCAA CGAGAATGAG CCCGGTGTCA CGTATTTTCC GATCACCGTC
GAGGGAATAG AGCATAAGGT CAAGGTGCGT GCCGCCATCG CTCGGCCCGA GGCGCGACGG
CCAGACGTGG CTGATCATCC CTGGCCCGCA GGCGCAAGTC CTAACAAGGA TGCCGGTAAT
CATCCTTGGG GCAAGCATGC GGGCCGCAAC ATCGGCATCT CCTTGGTCCG TCAGGGACGT
GAACTCGATC TGGATTCGTC CTGGGCGATT GGGTATGACC CGGTGGAGCG GTGGTGGGGA
GTCGAGGTTG AGTTCCCTCC GGCGCTAGAC GAGATCTTCG GTGTCACGAA CAACAAGCAG
ACGGCTACGA TCTTCTCGTC GCTCGCCCAC TTCGACTGGC AAGCCGAAGC GGAGGCCGAT
GAGACCTTCA AGGCGTTCAA GGACCGCCTC GCGGAGCTCG GGGACCCCCG CCTGCAACTG
TTCGACCTTG CTCTTTACCT CGAAACCAAG CTCCTACGCA CCATGCGCCG TCAGCTCAAG
CAGCAGACAG TTGGCCGGCG TAAGAGCAAG AAGCGGCATG ACGACGAGGT CACGTCCAAA
GCAACGGATG CGGTGAAGCG CAGGCGGGAC GAAGGCCACA CCGGCAAGAC CGACCAGCTC
GAGGACGGCG TCACCAACCA GGACAAGCGT CAGGAACAGG TGGACGCTCT TACCCAGCGA
CATCACCTTG ACGAAGACAC TGCACAATCC ATGGTCGACG AGGCGCTGGA GAAGGACTGG
CGTGTGCGGT GGATCTCCAG CTACCAGGAC ACGCACGCCT TCTTCAGCAT CGACCTCATG
GCAGGCATGC TCCAAGTGAT CTTCAACAAC AGTCATCCGC TACATGATCA GTTGCTTGCG
GTTCTTGAGG AAGTCCCTGA GGATGCAACC GATAGCGACC TGAAGTACCG CCTGCGTCGT
GCAGCCGACA CCTTCAAATT GCTGCTGTTC TCCTGGGCTC GGATGGAGGA CGAGATCCCC
AACGACAGGC AACGGGAGAA GATCGCCGAC GCGCGCCGGG ACTGGGGACG CTACGCCCGT
GACTTCATCG ACGGTGAGGC CGACGAGTGA
 
Protein sequence
MGARVTSDDS NYRIVTPALT VKAMRDSGYK NTAYALAELI DNSIDAGATL VEVFACESPV 
QVSSRTRQRV ETIAVLDNGK GMDSETLRRA LKYGDGLGDD RKRIGRFGMG LPNSSMSQCT
RVEVWSWTNG PGNALYTYLD LAEINDGRDA VPDPIHVQGG VPEYWRDLSD GLLSDTGTLV
VWRNLDRVNW YGAAATLKNT SELIGRVYRH FLHEDKVDIR MAPVRDGEVV AGAYYAAPND
PLYLMKSTCA PTPFDDKPMF EPFNMGNENE PGVTYFPITV EGIEHKVKVR AAIARPEARR
PDVADHPWPA GASPNKDAGN HPWGKHAGRN IGISLVRQGR ELDLDSSWAI GYDPVERWWG
VEVEFPPALD EIFGVTNNKQ TATIFSSLAH FDWQAEAEAD ETFKAFKDRL AELGDPRLQL
FDLALYLETK LLRTMRRQLK QQTVGRRKSK KRHDDEVTSK ATDAVKRRRD EGHTGKTDQL
EDGVTNQDKR QEQVDALTQR HHLDEDTAQS MVDEALEKDW RVRWISSYQD THAFFSIDLM
AGMLQVIFNN SHPLHDQLLA VLEEVPEDAT DSDLKYRLRR AADTFKLLLF SWARMEDEIP
NDRQREKIAD ARRDWGRYAR DFIDGEADE