| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0576 |
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| Symbol | |
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| ID | 8324735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 633802 |
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| End bp | 636642 |
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| Gene Length | 2841 bp |
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| Protein Length | 946 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644941119 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003098388 |
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| Protein GI | 256374728 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGTTCG GATTGCTGGG GCCGTTGGCC ATTTCGCACG AGGGAAGCCC GATCACCCTG
ACGAAGGCGG TGCCGCGCGC GACACTGGCC GTGTTGCTGC TGCACCACGG GCACCCCGTA
GCGGTCGAGC GGATCATCGA CGTCGTGTGG TCGGAGGCCG ATGGACCGCC ACTGACCGCC
AGGAGCATGG TGCAACGCAG CGTGAACTCT CTGCGGGAGC TGTTCAAGGT TGATCCCGAG
ACCACCCTGC GCACGCGCCC CGGCGGCTAC GAGCTGACCT GCCGCGAGGG GGCGCTTGAC
CTGCGGCGTT TCGAGGACCT GGTCGACCAG GCTGACGGGT GCGGGTCGCT GCGGGAGATG
GCCGCGGTAC TGCGTGAGGC GCTGCGGCTG TGGCGAGGGG ATCCGCTGTC CGATGTCACC
AACCGCGGGC TCGAGTCGTT CAAGACGGGC CTGACCGAGC GGCGCCTCAC CGTAGTCGAA
CGTTGCATCG AGCTCGAACT GCAGCTAGGC CGCCATCAGG AGATCGTCGC CGAGCTGCAG
TCGTGGACCG ACACGCATCC GTTCCGGGAG AGCTTGCTGG CGCTTCTGAT GCTCGCGCTG
CATCGCGGCG GTCGCACTAC CGACGCGTTG GCCGCTTACG CGGACTTCCG CGCGCGGCTG
GCTGAGGAGG TGGGGACCGA TCCCGGCACT GCGGTCCGCA TGTTGCACGA GCGGATCCTC
AACAACGACC ACACGCTCGC CGCGCCGGTG CAACGAGGCG TCGACACGGC GATACCCCAA
ACGGCGACCG ACCATGCCGA CACGCCTTCA CAGCCTGCCT GGGTAGTCCC TCGTCAGCTT
CCGGCGGGGC CGCGCTGGCT GGTGGGCCGA GACGAGCAAC TGGCCCAACT CGGTCAGGCG
CTCGCGGCCC GCGAGACTGG TCAGATGGCG GGCGCGGGCA CTCCGGTCGT CGTCGTCGTC
GACGGGATGG CGGGGATCGG TAAGACCGCT CTCGCGCTGA CGTTCGCCCA CCAGGTCAGC
GACCGGTTCC CGGATGGGCA GCTGTATCTG AACCTGCGCG GGTTCGGCCC GGCTGGCACA
CCGATGGCCG CCGGTGAGGC CGTTCGCACA TGTCTGGACG CGCTCGCGGT CGCGGTCGAC
GACATTCCGA CGTCGCTACA GGCACAAGCC GGGCTGTACC GCAGTCTTAT CGCGAACCGG
CGGATGCTGG TCGTGCTCGA CAACGCCGCT GACGCCGAGC AAGTACGACC GCTGCTGCCC
GCCAGCCCCG CCAGCATGGT GATCATCACG AGTCGGCGGC GCTTGGAGAG TCTGGTGGCC
ACCGACGGTG CCATCCCGCT CGCGCTCGAG GTTCTCAACG CCGCTCAGGC GTATGCCTTG
CTCGAGGCGG GTGTGGGTGC GGCACGGCTG GCCGCCGAGC CCGACGAAGT CGACGAGCTG
ATTGCGCGGT GTGCGGGGCT GCCGCTGGCG CTGCGGATCG TGCTGGCACG AGCGCTGACG
CGGCCGGGGT TCGCCCTGGC CGCTCTGGTG TCCACGCTGC GCGCGGCGCA GGACCGGCTC
GGCTCGTTCG ACGGCGGAGA CCCGGTAACG AACCTGCGCG TGGTGTTTTC CTGGTCCTAC
CGCGATCTGC CCGCCGACAC CGCCTGGGTC TTCCGCAGCC TTGCGGTGCA TCCCGGGCCG
GAGATGTCGG AGTCGTCGAT CGCGAGCACG TCAGGCCTGT CCCGCCCCGC CACGCGCGCG
GCGCTGGCCG AACTCGTGCA GCTGCACCTA CTACAGGAAC GCGCCCTAGG CCGGTTCAGC
CTGCACGACC TCATCCGCCT CTACGCCGTG GATCACCTGC ACGGCGACGG CGACGAGGTG
ATCGGCCGCG CACGGCAGCG CCTGGCCGAC CACTACCTGC ACTCGGCACA TCGCGCGGCG
ATGCTGCTGT ATCCGAGCCG GGACCCGATC ACGATCGCGG CACCACTGCC AGGGGTCTGC
CTCGACGAAT TCGCCGGCGA ACTTGAGGCT CGTGCCTGGT TCGGCACGGA GCATGCGGTA
CTGCTCGCTG TGCTGCACGA CGCCGCCCGG CACGGCCTGC ACGCCCACGC CTGGCAGATC
CCGTGGTCGA TGGTGGACTA CCTCGACTGG GGCGGGCACT GGCGCGACTA CATCGCAACC
CAGCAGATCG CGCTGGACGC CTCAGCTGCA CTCGGCGACC TCAACGGCCA GATCCGCGCG
CATCGAGGCC TGGGACGTGC GCACTTGCGG CTCGGCGACA TCGAGACCGC CCGAGGATTC
CTGACCCGCT CGCTGCAGCT GTCGCGGCAG AGCAACGACC CGCTGGGTGA GGCGCAAACC
CACCTGATCC TGGCGTGGAT GCACGAGCAG GACGGTGATT TCCGTTCAGC GTTGGGTCAC
GCCGAGCAGG CCCTGGAGGG GATGCGCGCG GGGCATGACG GCAGGGGAGT AGCCAACGCG
CTCAACACAG TGGGCTGGTA CCACACCCTG CTCGGCCAGC ACAGCACGGC GCTGCGGTAC
TGCGGGCAGG CATTGGAGCA GCACGAGCAG CTCGACGACC CGCAAGGCCA CGCCGACACC
TGGGACAGCC TCGGCCACGC CCATCGCGGC CTGCAGGACC TGCCACAGGC GATTACCTGC
TACACCCGTG CCGTCGAGTT GTATCGCACG ATCCAGCACG GCTACGACGA AGCCACCACT
CAGGCAAGCC TGGCCGAGAC GCTGCTGCTG TCCGGTGACA AGGACCGTGC CCGGGCCACC
TGGGAACATG CGCTCACCCT GCTGGCCCCG CTGGACCCGG ACGAGGCCGA CGCCATCCGC
TCACGCTTGA CGGCCCTGTA A
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| Protein sequence | MEFGLLGPLA ISHEGSPITL TKAVPRATLA VLLLHHGHPV AVERIIDVVW SEADGPPLTA
RSMVQRSVNS LRELFKVDPE TTLRTRPGGY ELTCREGALD LRRFEDLVDQ ADGCGSLREM
AAVLREALRL WRGDPLSDVT NRGLESFKTG LTERRLTVVE RCIELELQLG RHQEIVAELQ
SWTDTHPFRE SLLALLMLAL HRGGRTTDAL AAYADFRARL AEEVGTDPGT AVRMLHERIL
NNDHTLAAPV QRGVDTAIPQ TATDHADTPS QPAWVVPRQL PAGPRWLVGR DEQLAQLGQA
LAARETGQMA GAGTPVVVVV DGMAGIGKTA LALTFAHQVS DRFPDGQLYL NLRGFGPAGT
PMAAGEAVRT CLDALAVAVD DIPTSLQAQA GLYRSLIANR RMLVVLDNAA DAEQVRPLLP
ASPASMVIIT SRRRLESLVA TDGAIPLALE VLNAAQAYAL LEAGVGAARL AAEPDEVDEL
IARCAGLPLA LRIVLARALT RPGFALAALV STLRAAQDRL GSFDGGDPVT NLRVVFSWSY
RDLPADTAWV FRSLAVHPGP EMSESSIAST SGLSRPATRA ALAELVQLHL LQERALGRFS
LHDLIRLYAV DHLHGDGDEV IGRARQRLAD HYLHSAHRAA MLLYPSRDPI TIAAPLPGVC
LDEFAGELEA RAWFGTEHAV LLAVLHDAAR HGLHAHAWQI PWSMVDYLDW GGHWRDYIAT
QQIALDASAA LGDLNGQIRA HRGLGRAHLR LGDIETARGF LTRSLQLSRQ SNDPLGEAQT
HLILAWMHEQ DGDFRSALGH AEQALEGMRA GHDGRGVANA LNTVGWYHTL LGQHSTALRY
CGQALEQHEQ LDDPQGHADT WDSLGHAHRG LQDLPQAITC YTRAVELYRT IQHGYDEATT
QASLAETLLL SGDKDRARAT WEHALTLLAP LDPDEADAIR SRLTAL
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