Gene Amir_0570 details

Gene Information

• Locus tag: Amir_0570
• ID: 8324729
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 619562
• End bp: 625705
• Gene Length: 6144 bp
• Protein Length: 2047 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644941114
• Product: conserved repeat domain protein
• Protein accession: YP_003098383
• Protein GI: 256374723
• TIGRFAM ID: [TIGR01167] LPXTG-motif cell wall anchor domain; [TIGR01451] conserved repeat domain

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGAGA TAGGGATGGC GCGCCGCCTC ACCGCGGCCA TGATTTCCAC TGGCCTAGCG 
CTGGGAGGCA CGCTGGTCGC GACGGGGGTC GCCGAAGCGA CCGTCGTCAC CAACTTCACC 
CCCGTGTACG AAAAGTCCGT CTACGGCGAC TTCGTCCAGA CGGGCAACGG CAACATGGGC 
TGCCCGACGG GGGCCGACCC GGCCTCGCTC AACAGCCTGT CCTTCACGGA CTGCGTGACC 
GCCCAGGGCG GCACGGCCAC CGGCAACAAC GGCCGCGAGT CCCACTACAT GAAGTACGTG 
GACGCGGACG GCGGGGGCAA CGTCGCCACG TACAACTCCT CGATCGCCAA GGTCAACATT 
CCGGCGGGCG CGACCATCGA CTACGCCCGG CTCCACTGGG GCGGCAACAC CGGCGTCTTC 
CGCAACGCCA CGGACGCCAC CGGCAACCGG GGCTGCGCGC CCGGCTACAC CAGCTCGGCG 
AGCACCTTCC CGGCGGGCAA CCCCGCCACC GCCCAGATCT CGATGGCCAT CGGCGCGGGG 
ACCCCGCTGA CCATCGGCCC CGACTCCTAC GTCGCCGACG ACGCCCCGAC GCTGGTGCAG 
AACGAGGCCC AGCAGTACGT GGCGTGGACC GACGTCAAGA GCCTGCTCGG CCCGGCCGTC 
ACCGGCTCCG ACGTCAACCT GACCATCGGC AACATCTGGA CCCCCCAGGG CTACGGCTGC 
CACGCGGGCT GGTCGCTGAC CGCCGTCTAC GCCCTCCCCA ACCCGACCGG TGGCGCGATC 
AAGCGCTCCA TCCAGATCAA GAACGGCTAC GTCAAGCAGC ACGCCTCCGA GGGCAACTAC 
ACGACCTCGC TGGAGACCCT CGACGGGGCC AGCAAGACGA CCGGCAGCCG CCTCGGCGTC 
ACGGCCTTCG GCGGCCACCA GAACCTGACC TCCGACGCGC TGTCCTACAA GGGCACCGCG 
CTCACCGAGC CCAGGCTCAA CAACTCGACG AACTTCTTCG CGTCCACGGC GACCAACCAG 
GTCACGCCGT CGGTCGTGAA CAACTTCAGC GTCGACGCCA AGGTCGCGGT GCCGACCAAC 
GTCGCGGTGG GCGACCGGAG CGGCGCCGTG GTCGTGGGCA GCGGCAGCGA CACGTTCGTG 
CTCTCCAGCC TCGCCATGTC CGTGCCGACC CCCGGCATCT ACATCACCGC GACGCCGAGG 
ACCACCCCGC CGTACTACCA GGGCGACTCG GTCATCTACG ACGTCGTGGT CGGCACCTCG 
GACAACCAGA CGATCACGAA CGTCGGGGTC AGCAACACCG ACCAGGCGTT CGGGGACTGC 
AACAGGCCCA GCACCGCCAC GTTGACCAGC GGCAACCCCA CGCTCTCGTA CTCGTGCACC 
GTCCCGGCGG GGACCGCGAA CTTCAACAAC ACCATCCAGG CGGTGGGCGC CAACGCCTTC 
CTGGAGCCGG TCAGCGACTC CAAGACGATC ACGGCGACCG TGAGCACCAT CGGCCTGTCG 
CTGACCAAGA CCGCCGACAA GGCGACCTAC AGCGCGGGCG AGACGATCAC CTTCACCGTC 
ACCGCCGCGA ACACCGGCAA CACGGCGCTG ACCAACGTCG CGATCGCCGA CGCGAAGGTG 
AACGCCTGCG CCAAGAACCA GGCGACCCTC GCGGCGGGCG CGCAGCTCGT CTCCACGTGC 
ACGGCCACCG CGCCGATCGC CGGTGACGCG AACACGGCCA CCGTGTCGGC CACCGACGCG 
CGTGGCGGCA CCGTCAACAA CACGGCCACC GCGAACGCCT ACTCCGAGGG CGCCATCTCC 
GGCCGGGTCT TCGCCGACCG CGACGACAAC GGCGCGTTCG ACGCCCCCAT GGGCGACACC 
AACCTGGTGA ACGTCGGGAT CTCGCTGACC GGCACCGAGA CCAACGGCGG CGCCCCGGTC 
AGCCTGAACA CGGTCACCGC GCCCGACGGC ACGTGGTCCT TCGCGAACCT GAAGGCGGGC 
AACTACACCG TCACCAAGGA CCCGACACCG GACTACGACC CCGGCAAGCG CACTCCGGGC 
AACGCGGCCA CCGCGCCTCT CAACACCGAG ACGTTCACCG TCGCGCTCCC CGGCGGCCAG 
TCCTCCACCG GCAACCTGTT CGCCGTGATC CCCACGTCGA GCCTGTCCGG CTTCGTCTAC 
GAGGACAGCA ACAACAACGG CGTCAAGGAC ACCGGTGAGA AGGGCATCCA GGGCGTCGCG 
ATCGCGCTGA GCGGCATCGA CGACGGCGGC AACGCGGCGA ACTGGAACAC CAGCACCGAC 
GTCGACGGCG CGTACACCTT CAAGGCCCTG CGCCAGGGCA ACTACAACCT GTCCGAGACC 
CAGCCCGCGG GCTGGACCGA CGGCAAGGAC ACCCCCGGCT CGGCGGGCGG CACGCGCGAC 
GCGCCGGACT CGATCGTCAA CATCCAGCTC GACCCGCGCG TCACCGCCAT CGACTACCTG 
TTCGGCGAGT ACAAGGGCAC GTCGATCGCG GGCAAGGTCG TGGACGACAA GGACATGGGC 
ATCGCGGGCG TCAAGCTCAC GGTGACCGGC GGCGCCGGTC CGCTGGAGGC GACCACCGAC 
GCGGGCGGCG CGTTCAGCTT CACCCTCGCG CCGGGCACCT ACACCCTCAC CGAGGAGCAG 
CCGCTCGGCT ACGCCCAGGG CACCGACACG GTGGGCACCA CCGGCGGCAC CCACTCGGCG 
GAGAACACCT TCAGCGCCAT CGTGCTGAAG TCCGGCGACG CGGGCACCGG CTACGTCTTC 
AAGGAGAAGC GCGGCTCGCT GACCGGCTAC GTCTACGAGG ACAAGAACGG CAACGGCAAC 
AAGGACGCCG CCGAGCCGGG CATCGCGAAC GTCAGCGTGA AGATGACCGG CACGGACGCG 
ATGTCCCGCC CGGTCAACAC CACGATGACC ACCAACTCCC AGGGCCTCTA CACCTTCGCG 
GGTGTCGTCG GCGGCACCTA CTCGCTGACC GAGACCCAGC CCGAGGGCTA CGAGAACGGC 
GTGGACAAGG CGGGCACGGT CGGCGGTGAC TACACGCCGC CGGACACGAT CAGCGACATC 
TCGTTCCCGG CGGGCGCCGA CGCGACCGGC TACCTGTTCG GCGAGTACAA GTTCGGCTCG 
ATCTACGGCG AGGTCCTGAA CGACAAGGGC AACCCGATCG CCAACGTGAA GATCACGCTG 
GAGAACGACG AGCGCGCCCC GATCGGCCAG ATGACGATGA CCGACGAGTT CGGCCAGTTC 
GTCTTCGAGG ACATCGTCCC CGGCACCTAC AAGCTGGTCG AGGAGCAGCC GGCCGGCTAC 
GCCGACGGCC CGGACACGGC GGGCACCGGT GGGGGTGACA CCTCCGTCGC CGACACCATC 
GGCCTGATCC CGGTCGGGTC CGGCGACATC CTCACCGGCT ACCAGTTCAC CGAGAAGCGC 
GGCTCGCTCG CGGGCTACGT CTACGAGGAC ACCAACAACA ACGGCCTCAA GGACACCGGC 
GAGAAGGGCA TCCAGGGCAC CGAGCTGACC CTGACCGGCA CCGACGCGCA GGGCAAGGCC 
GTCAACCTGA CGGCGACCAC CGACGCCGCC GGTCTGTACA AGATCGAGTT CATCGTCGGC 
GGCACGGGCT ACACGCTCAG CGAGAAGCAG CCCGCCGGGT ACGTGACCGG CAAGAACAAG 
GTCGGCAGCC AGGGCGGCAC GCTCACCGCG CCCGACAAGG TCACCGGCAT CACCTTCTCC 
GCGGGCGCCG CGGCGACCGG CTACCTGTTC GGCGAGCTGA CGCCCGCCTC GCTGGCCGGC 
GACGTGGTCA ACGAGAAGGG CGAGGGCATC GCGGGCGTGA CCGTGGTGCT GACCGGCACC 
GACGACATGT CGACGACCGT CAACAAGTCC GCGGTCACCA CGGCGGGCGG CAAGTACGCG 
TTCAACTCGC TGCGCCCCGG CACGTACAAC GTGACCGAGA CGCAGCCGGA CGGCTACGGC 
CAGGGCACGG CCACCCCCGG CAGCGCGGGC GGCACGGCGC TGGGCGCCGA CGAGATCACC 
GGTGTGGTGA TCACCTCGGA GGCGAAGGCC ACCGGGTACC GCTTCAGCGA GAAGCGCGGC 
TCGCTCTCCG GCGTGGTCTT CGACGACCGC GACAACGACG GCGTGCGCGA CGACGGCGAG 
CCGGGCATCC AGGGCGTGAC CCTGACGCTG AAGGGCAACT CGGAGTGGTG CGCGGTCGGC 
GAGCCCGACG GCACCGACAC CGAGACCGAC AACGGCACGG GCACCCCGAC GCCGGACACG 
GGCACGGACC CCGGTACGGG TACTGACCCC GGCACGGGCA CCGACCCCGG TACAGGTACT 
GACCCTGGCA CCGGTACCGA CCCCGGTACT GGCACCGACC CCGGTACGGG TACTGACCCC 
GGCACCGGTA CCGACCCCGG TACGGGTACC GACCCCGGCA CTGGCACCGA CCCCGGTACG 
GGCACGGACA CCGGCACCGA CCCCGGCACC GGTTCGGGCG GCACGCCTGA CACCGGCGTG 
GGCGCGGGTG GCACTCCGGA CACCGGTGGC GGCCGGGTCG ACCCGACCGA CGCCACCGCC 
GACGCCACCA CCGCCGACGG CGAGATGACC ACCATGGCCG ACCCGGCCGT CTCGGCGGGC 
GACGCCGCGC CGACCTGCGC GGTCACCCTC ACCGCCACCA CCGACGCGTC CGGCGTGTTC 
TCCTTCGCCG GCCTGGTCGG CGGCACGTAC GACCTGATGG AGACCCAGCC CGCCGCGTAC 
GCGGACGGCA AGGACACCGC GGGCACGGCG GGTGGCACCG TCACCGCTCC CGACGCGATC 
ATGGGCATCG TGCTGGCGGG CGGCGTCGAC GCCACCGGTT ACCTGTTCGG CGAGCGCGCC 
GGCGTCATCA CCGGCACGGT CTGGGTCGAC GCCAACGGCG ACGGCAAGAT CGACACCACC 
GAGCTGGGCC GCATCGCAGG CGCCAAGGTC GACCTGATGC AGGGCGACAG CACCACCCCG 
CTCGCCAGCG CCACCACCAC GACCGAGGGC ACCTACGAGT TCAAGGACGT CCCCGCGGGC 
GACTACTCGC TGATGCTCAC GCTTCCGATG GGCTACGGGG CGACCACGCC GACCACGGTC 
AAGGTCACCA CGACCACGAC CAGCGGCACG AACGTGGACT TCGGCGTGCA GAAGGGCGCC 
ATCGGCGACT TCGTGTGGGA CGACCTGAAC CGCAACGGCC TGCAGGACGC TGGTGAGCCC 
GGCATCGCCG GGGTCAAGGT CAACCTGCTG GACGAGCAGG GCGAGGTGAA GAGCAGCACC 
ACCACGAACG CCAGCGGCAA GTACATGTTC GGCGACCTGG ACGAGGGCAC CTACCGCGTC 
CAGTTCACCG TGCCCACCGG CCGCACGTTC ACCGCGCAGA ACGCGGGCGC TCCCGAGAAG 
AGCTCCGCGG TCGACCGCTC GAACGGCCTC AGCGGGCCGA TCGTGTTCAA GGTGGCCGAC 
AGCAAGGTCA TGCAGAACAT GAACGTCGAC GCCGGTGTCG TCGACCGGAT CACGGACCTG 
GGCGTCACCC TCACGGCGGA CAACCCGTCG CCGCAGGTGG GCTCGCAGGT CGTGATCACC 
AGCAAGGTGG TCAACACCGG GACCGTGCCG GTCAACGGCG CGATCGCGAC GATCACCATC 
CCGCAGGGCC TGACCATCAA CGGGGTCGAC GGCGGCGCGC CGCAGGCCCA GGGCGTGGCG 
ATGGCCAGGG CCGCTCGGGC GGACGAGGGC TGGACCTGCG CGGTGAACGG CCAGCAGGTC 
GTCTGCACCA CGCCGGACGT CATCCAGCCG GGCGCCTCCT CGCTGCCGAT CACCATCACC 
ACCACCGCGA ACAGCGCGTT CACCACCACG AACGCCACCG CGCTGGTGAC GCTGGCGGAC 
GGCACGGGCG ACGACAACCC GGCCAACGAC GGCGCGACCA CCCCGGCCCT GTCGACGGAG 
ACCCCGTCCA CGGGCGGCCC CAACACGGGT GGTGGCACGA CGCAGCAGCC GATGCCCCCG 
ATGCCCCCGA ACGGCATGGG GAACATGCCG CTCGCGTGGA CCGGTTCGGA GATCCGACCG 
GTGCTGATCG GCGGCCTGGC GCTGCTCCTC GCGGGCCTGG GAACCCTGTT CCTCGGCAAG 
CGCAGGCGCA AGCAGGGCAT GTGA 

 

Protein sequence

MPEIGMARRL TAAMISTGLA LGGTLVATGV AEATVVTNFT PVYEKSVYGD FVQTGNGNMG 
CPTGADPASL NSLSFTDCVT AQGGTATGNN GRESHYMKYV DADGGGNVAT YNSSIAKVNI 
PAGATIDYAR LHWGGNTGVF RNATDATGNR GCAPGYTSSA STFPAGNPAT AQISMAIGAG 
TPLTIGPDSY VADDAPTLVQ NEAQQYVAWT DVKSLLGPAV TGSDVNLTIG NIWTPQGYGC 
HAGWSLTAVY ALPNPTGGAI KRSIQIKNGY VKQHASEGNY TTSLETLDGA SKTTGSRLGV 
TAFGGHQNLT SDALSYKGTA LTEPRLNNST NFFASTATNQ VTPSVVNNFS VDAKVAVPTN 
VAVGDRSGAV VVGSGSDTFV LSSLAMSVPT PGIYITATPR TTPPYYQGDS VIYDVVVGTS 
DNQTITNVGV SNTDQAFGDC NRPSTATLTS GNPTLSYSCT VPAGTANFNN TIQAVGANAF 
LEPVSDSKTI TATVSTIGLS LTKTADKATY SAGETITFTV TAANTGNTAL TNVAIADAKV 
NACAKNQATL AAGAQLVSTC TATAPIAGDA NTATVSATDA RGGTVNNTAT ANAYSEGAIS 
GRVFADRDDN GAFDAPMGDT NLVNVGISLT GTETNGGAPV SLNTVTAPDG TWSFANLKAG 
NYTVTKDPTP DYDPGKRTPG NAATAPLNTE TFTVALPGGQ SSTGNLFAVI PTSSLSGFVY 
EDSNNNGVKD TGEKGIQGVA IALSGIDDGG NAANWNTSTD VDGAYTFKAL RQGNYNLSET 
QPAGWTDGKD TPGSAGGTRD APDSIVNIQL DPRVTAIDYL FGEYKGTSIA GKVVDDKDMG 
IAGVKLTVTG GAGPLEATTD AGGAFSFTLA PGTYTLTEEQ PLGYAQGTDT VGTTGGTHSA 
ENTFSAIVLK SGDAGTGYVF KEKRGSLTGY VYEDKNGNGN KDAAEPGIAN VSVKMTGTDA 
MSRPVNTTMT TNSQGLYTFA GVVGGTYSLT ETQPEGYENG VDKAGTVGGD YTPPDTISDI 
SFPAGADATG YLFGEYKFGS IYGEVLNDKG NPIANVKITL ENDERAPIGQ MTMTDEFGQF 
VFEDIVPGTY KLVEEQPAGY ADGPDTAGTG GGDTSVADTI GLIPVGSGDI LTGYQFTEKR 
GSLAGYVYED TNNNGLKDTG EKGIQGTELT LTGTDAQGKA VNLTATTDAA GLYKIEFIVG 
GTGYTLSEKQ PAGYVTGKNK VGSQGGTLTA PDKVTGITFS AGAAATGYLF GELTPASLAG 
DVVNEKGEGI AGVTVVLTGT DDMSTTVNKS AVTTAGGKYA FNSLRPGTYN VTETQPDGYG 
QGTATPGSAG GTALGADEIT GVVITSEAKA TGYRFSEKRG SLSGVVFDDR DNDGVRDDGE 
PGIQGVTLTL KGNSEWCAVG EPDGTDTETD NGTGTPTPDT GTDPGTGTDP GTGTDPGTGT 
DPGTGTDPGT GTDPGTGTDP GTGTDPGTGT DPGTGTDPGT GTDTGTDPGT GSGGTPDTGV 
GAGGTPDTGG GRVDPTDATA DATTADGEMT TMADPAVSAG DAAPTCAVTL TATTDASGVF 
SFAGLVGGTY DLMETQPAAY ADGKDTAGTA GGTVTAPDAI MGIVLAGGVD ATGYLFGERA 
GVITGTVWVD ANGDGKIDTT ELGRIAGAKV DLMQGDSTTP LASATTTTEG TYEFKDVPAG 
DYSLMLTLPM GYGATTPTTV KVTTTTTSGT NVDFGVQKGA IGDFVWDDLN RNGLQDAGEP 
GIAGVKVNLL DEQGEVKSST TTNASGKYMF GDLDEGTYRV QFTVPTGRTF TAQNAGAPEK 
SSAVDRSNGL SGPIVFKVAD SKVMQNMNVD AGVVDRITDL GVTLTADNPS PQVGSQVVIT 
SKVVNTGTVP VNGAIATITI PQGLTINGVD GGAPQAQGVA MARAARADEG WTCAVNGQQV 
VCTTPDVIQP GASSLPITIT TTANSAFTTT NATALVTLAD GTGDDNPAND GATTPALSTE 
TPSTGGPNTG GGTTQQPMPP MPPNGMGNMP LAWTGSEIRP VLIGGLALLL AGLGTLFLGK 
RRRKQGM