| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0547 |
|---|
| Symbol | |
|---|
| ID | 8324706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 590868 |
|---|
| End bp | 591659 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644941091 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003098360 |
|---|
| Protein GI | 256374700 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAGT CGAACGTTCC CGGACGCGCC GGTGAGCTGG TCGTGCGGAC CTGGCCGAAC
CTGGAGGCCA CCTGGTTGGC GGTGCTCGTG CACGGGTGCG GGGAGCACGC CGGGCGGTAC
GGGCACGTCG CCGAGGCCCT GGTGGCGGCG GGCGCGCTGG TGGTCGCGGC GGACCAGGCC
GGGCACGGGG CGTCGGAGGG CGAGCGGGCT CTGGTCGAGG ACCTCGGGAC GCTCGTCGGC
GACGTCGACA CCGTGATCGG CGCGGCCGGG GTGGACCTGC CGGTGGTGCT GGTCGGGCAC
GGCGTCGGCG GCCTGGTGGC GGCCCGGTAC GCGCAGGACC ACCAGGACCG GCTCGCCGCG
CTGGTGCTGT CCGCGCCCGT GCTGGGCGCG TGGGAGGGCC TGGACGCGCT CGGCGGCGAC
GACCTGTCCG GCACGGAGGT CGACCCGGCC GAGCTGTCCC GCGACGAGGA GGTCGGCCGC
GCGTACGCCG CCGACCCGCT GGTGTGGCAC GGCCCGGTGC CCCGGCCGAC CCTGGAGGCG
GTGGAGCGGG CGATCGACGA GGTGAACTTC GGGCCGGTGC TGGACCGGGT GCCGGTGCTG
TGGCTGCACG GCGGGGCCGA CCGGCTGGTC CCCGAGGCCG ACACGCGCAC CGGGGCGGAC
CGGCTGCGCG GGGCGCGGTT CGAGGAGCGG GTCTATCCGG GGGCGCGGCA CGAGGTGCTG
CGCGAGACGA ACCGGGACGA GGTGCTCGGC GACGTGGTCG ACTTCGCCAG GCGGGCGTTG
GGCGGGAGCT GA
|
|---|
| Protein sequence | MIESNVPGRA GELVVRTWPN LEATWLAVLV HGCGEHAGRY GHVAEALVAA GALVVAADQA
GHGASEGERA LVEDLGTLVG DVDTVIGAAG VDLPVVLVGH GVGGLVAARY AQDHQDRLAA
LVLSAPVLGA WEGLDALGGD DLSGTEVDPA ELSRDEEVGR AYAADPLVWH GPVPRPTLEA
VERAIDEVNF GPVLDRVPVL WLHGGADRLV PEADTRTGAD RLRGARFEER VYPGARHEVL
RETNRDEVLG DVVDFARRAL GGS
|
|---|
| |