| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0519 |
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| Symbol | |
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| ID | 8324678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 557855 |
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| End bp | 559624 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644941063 |
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| Product | ABC transporter related |
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| Protein accession | YP_003098332 |
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| Protein GI | 256374672 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00043092 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGACC AACGTACTTC CACGGCCGCG ACCCTGCGCA GGCTGTGGCC CTACCTGCGC
CCCGTCAAGA ACCCGATAGC CGTCAGCACC GGGGCCGCCG TGCTCGCCAT GCTGTGCGGG
CTCGGCATCC CGCTGGTCAC CCAGCGGGTC GTCGACGGCC CGATCGCGCA CCGCGACTTG
TCCGCCCTCC CCTGGCTGAT CGGCCTCGTC CTGGCGCTCG GCCTCGCCGA GGCCCTGCTC
TTCTACACCC GCCGCAAGGT CATCGCCCGC CCCGCCTCGA CCGTCGAGCT GGCCATGCGC
ACCGACCTCT ACACCCGCCT CCAGGCGCTC CCGGTCTCCT TCCACGACCG CTGGCAGTCC
GGGCAGCTGC TCTCCCGCGC CACCAGCGAC CTCACCACCG TGCGCCGGTT CGTCGCGTTC
GTGCTGGTGT TCCTGCTGGT CAACACCACC GTCATCGTCA TCGGACTCGG CGTCCTGTTC
TGGCTGTCGC CGCTGCTCGG CCTGGTGGCG CTGGTGTCCA CCCTGCCGCT GATCGCCCTG
TCCTACCTGT TCGAGACCCG CTACAAGGTC GCCGCCCGCC TCTCCCAGGA CCAGGTCGGC
GACCTCACCA CCACGGTCGA GGAGTCCGTG CTGGGCATCC GGGTGCTCAA GGCGTTCGGC
CGGGGCCCGC ACCTGGCCGC CCGGTTCCAG CGCCAGGCCC GCGAGCTGCG CGGCACCGAG
CTGGTCAAGG TCCGGGTGTT CGCCGCGCTG TGGGCCGCGC TGCTGGTGCT GCCCGAGCTG
TCCATCGCGG GCCAGCTCGC CGTGGGCGCG TTCGGCATCA CCTCCGGCAC GATGACGGCG
GGCACCCTCA TCGCCGCCAT CGCGGTCAGC GCCTACCTGC GCTGGCCGGT CGACTCGATC
GGGTGGTTGT TGTCCGAGAC CAACCAGACC GCGGCGGCCG TCGAGCGCTA CTTCGAGGTG
CTCGACGAAC CGGTCGCGAT CACCTCTCCC CCCTCTCCGA AACCGCTGGC CACGCCGGTG
CGCGGGCACC TGCGCTTCGA GGGCGTCCGC TTCGGCCACC CCGGCTCGGA CGACGAGGTG
CTGCGCGGCG TCGACCTGGA GGTGCGGCCC GGCGAGACCG TCGCGCTGGT CGGCGCGACC
GGGTCCGGCA AGACCGCGCT GACCGCGCTG GTGCCCAGGC TCGCCGACGT CACCGGCGGC
CGGGTCACCC TGGACGGGGT CGACGTGCGC GAGCTGGACC TGGCCGAGCT GCGCCGGGTC
GTCGGCACCG CGTTCGAGGA ACCGGTCCTG TTCTCCGCCA GCGTCACCGA GAACGTCGTC
CTCGGCGGCG GGGACGCCTC GCCGCACGCG GTGCGCGAGG CGCTGCGGGT GGCGCGCGCC
GAGGAGTTCG TCGACGCCCT CCCGTGGGGC CCGGACACCC GCATCGGCGA GCAGGGCCTG
TCGCTGTCCG GCGGCCAGCG GCAGCGGCTC GCGCTGGCCC GCGCGGTCGC GGGCAGACCG
GCGGTGCTGG TGCTGGACGA CCCGCTGTCC GCGCTGGACG TGCACACCGA GGCCGAGGTG
GAGGCCGCGC TGCGCCGCGT GCTGCGCGAC GTGACGGCGC TGGTCGTCGC GCACCGGTCG
AGCACCGTGC AGCTCGCCGA CCGGGTGGCC GTCCTCTCCG GCGGCCGGAT CACCGCGATC
GGCACGCACC GCGAGCTGCT CGCGGGCAAC ACCGAGTACC GCCACCTGCT GTCGACCCTG
GCCGACGAGG ACGAGGAGGT GCGGGTGTGA
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| Protein sequence | MNDQRTSTAA TLRRLWPYLR PVKNPIAVST GAAVLAMLCG LGIPLVTQRV VDGPIAHRDL
SALPWLIGLV LALGLAEALL FYTRRKVIAR PASTVELAMR TDLYTRLQAL PVSFHDRWQS
GQLLSRATSD LTTVRRFVAF VLVFLLVNTT VIVIGLGVLF WLSPLLGLVA LVSTLPLIAL
SYLFETRYKV AARLSQDQVG DLTTTVEESV LGIRVLKAFG RGPHLAARFQ RQARELRGTE
LVKVRVFAAL WAALLVLPEL SIAGQLAVGA FGITSGTMTA GTLIAAIAVS AYLRWPVDSI
GWLLSETNQT AAAVERYFEV LDEPVAITSP PSPKPLATPV RGHLRFEGVR FGHPGSDDEV
LRGVDLEVRP GETVALVGAT GSGKTALTAL VPRLADVTGG RVTLDGVDVR ELDLAELRRV
VGTAFEEPVL FSASVTENVV LGGGDASPHA VREALRVARA EEFVDALPWG PDTRIGEQGL
SLSGGQRQRL ALARAVAGRP AVLVLDDPLS ALDVHTEAEV EAALRRVLRD VTALVVAHRS
STVQLADRVA VLSGGRITAI GTHRELLAGN TEYRHLLSTL ADEDEEVRV
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