Gene Amir_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0512 
Symbol 
ID8324671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp551682 
End bp552701 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content75% 
IMG OID644941056 
Producthistidine kinase 
Protein accessionYP_003098325 
Protein GI256374665 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGAAC GGGCGAAGTG GGGGCTGATC ACCGGGGCCG GGCTGCTCGT CGCGGCCTGC 
GGCGCGCTCC TCCCGGACGT CACCGCGGAG CGGCACTGGG CGGCGGTCGC GGTGATCGCG
GTGATCGCCG CGTGGGTGCT GCTCCAACCA CGACAGCTCT ACCTGATCGG GCTGCACGCG
CTCACGGTGA CGGCGATGTG GCTGTCACCG GGGGCGACGT TCCTGCTGTT CGCGGTGCTG
CCCGAGGTGT ACCGGCGGAT CCCGCTGCGC CCCGCCTTCT GGGTGATGCT CGCGTTCGTC
GTGCCGCCGT GGCTGCTCTC GTGGGCCAGG ACCGGCGACC CGACGTCGAT GCTGCTGGTG
CTGCTCCCGA CCGCGCTGTT CTCCCAGCTG TTCGGCTGGG TGATCCGCAC GCTGGCCGAG
CAGAACCTCG TCATCGCCGA GCTCTCGCAC GAGGCGGGCG TCGCCGCCGA GCGGGAACGG
CTGTCGGCGG AGATCCACGA CACCCTGGCG CAGGGCTTCA CCAGCATCGT GACCCTGGTC
CAGGCGGCCC GCGCCGACCC GGTCCGCGCC GACGACCACC TGGACCTGGC GCTGCGCACC
GCGCGGGAGA ACCTGGCCGA GTCGCGGGCG CTGGTGGCGG CGCTCGCGCC CGCCGCGCTG
GAGGGCTCGC TGGCCGACGC GCTGCGCAGG CAGGTGGAGC GGGTGGCGGA CTTCGGCGTC
CGGGCCGAGT TCGCCGAGCG CGGTGCGGGG GAGGTGCCGC GCGCGGTCGA GGTGGTGCTG
CTGCGCGCCG CGCAGGAGGC GCTGACCAAC GCCCGCAGGC ACGCCGCCCG CGTGCGCGTG
GAGCTGGACG TGCTGCCGGA CTCGGTGCGG TTGACCGTGC GCGACGACGG TCCGGGCTAC
CGGGGCGCGC CGGAGGGCTT CGGCCTGCGC GGGATGCGGG CCAGGCTGGA GCAGGTCGGC
GGAACGCTGA CCCGCTCGGA CGACGACGGC GCGGTGCTCG TCGCCGAGGC GCCCAGGTGA
 
Protein sequence
MDERAKWGLI TGAGLLVAAC GALLPDVTAE RHWAAVAVIA VIAAWVLLQP RQLYLIGLHA 
LTVTAMWLSP GATFLLFAVL PEVYRRIPLR PAFWVMLAFV VPPWLLSWAR TGDPTSMLLV
LLPTALFSQL FGWVIRTLAE QNLVIAELSH EAGVAAERER LSAEIHDTLA QGFTSIVTLV
QAARADPVRA DDHLDLALRT ARENLAESRA LVAALAPAAL EGSLADALRR QVERVADFGV
RAEFAERGAG EVPRAVEVVL LRAAQEALTN ARRHAARVRV ELDVLPDSVR LTVRDDGPGY
RGAPEGFGLR GMRARLEQVG GTLTRSDDDG AVLVAEAPR