Gene Amir_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0479 
Symbol 
ID8324638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp517475 
End bp518131 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content75% 
IMG OID644941023 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_003098292 
Protein GI256374632 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGCTGA CCATCGGTTT CGACCTGGAC ATGACCCTCA TCGACCCCAG GCCGGGCATG 
GCCGCCGTGA TGGAGGCGGT TCGCGCCGAG AGCGGCTACC CGATCGACGG CGCGCACTTC 
GCCGCCAACC TCGGCCCGCC CCTCGACGTC TCGTTCCGGG GGTACGGCGT GCCCGAGGAG 
GACGTCCCGG TCCTGGTCGC CCGCTTCCGC GCGCTCTACC CGGAGATCGT CATCCCGGCG 
ACCGTCGCGC TGCCCGGCGC GGCCGAGTCG CTCGACGCCG TGCGCGAGCT GGGCGGGACC 
ACCGTCGTCG TCACCGGCAA GTACCGGGCG AACGCGGCGC TGCACCTGGC CGCGTTCGAC 
TGGGAGGTCG ACCACCTGTT CGGCGAGCTC TGGTCCACCG GCAAGGCCGA GGCGCTCAAG 
CTGCACGGGG CCTCGGCGTA CGTCGGCGAC CACGTGGGCG ACGTGCGCGG CGCGAAGGCC 
GCAGGCGCGC TGTCCGTGTG CGTGGTCACC GGGCCGTGCG ACGAGCGGGA GCTGGTCGAG 
GCGGGCGCGG ACGTGGTCAT GCCCGACCTG ACCGGCTTCC CGGCGTGGCT GCGCGAGAAC 
GCCGACCGGC TCCGCGCGAC CGGGCGCGCC GCCCTGGAAG CCGAGCGCCC CGCCTAG
 
Protein sequence
MPLTIGFDLD MTLIDPRPGM AAVMEAVRAE SGYPIDGAHF AANLGPPLDV SFRGYGVPEE 
DVPVLVARFR ALYPEIVIPA TVALPGAAES LDAVRELGGT TVVVTGKYRA NAALHLAAFD 
WEVDHLFGEL WSTGKAEALK LHGASAYVGD HVGDVRGAKA AGALSVCVVT GPCDERELVE 
AGADVVMPDL TGFPAWLREN ADRLRATGRA ALEAERPA