| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0407 |
|---|
| Symbol | thiE |
|---|
| ID | 8324566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 447158 |
|---|
| End bp | 447916 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644940951 |
|---|
| Product | thiamine-phosphate pyrophosphorylase |
|---|
| Protein accession | YP_003098220 |
|---|
| Protein GI | 256374560 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0667813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGGAC TTGACGCTAC CCAGATCAGG CGCAGGCTCG CCGACGCCCG GCTGTACCTG
TGCACCCCCC ACCGGCCCGA CCTGGCCGAG TTCGCCGACG CCGCGCTCGC GGGCGGGGTG
GACGTCGTGC AGTTGCGCGA GAAGGGCATG GAGGCGCGGC AGGAGCTGGC CGCCCTCGAG
GTGCTCGCGG AGGCGTGCGC GCGGCACGGG GCGCTGCTCG CGGTGAACGA CCGGGCGGAC
GTGGCCCTCG CCGCCGGGGC CGACGTGCTG CACCTCGGCC AGGACGACCT GCCCGTCCCG
CTGGCCCGGC GGGTGGTCGG GGAGGAGGTG GTGATCGGGC GGTCCACGCA CGACGTCGCG
CAGGCCTCGG CGGCGGCGGT CGAGCCGGGC GTGGACTACT TCTGCACCGG GCCCTGCTGG
CCGACGCCGA CCAAGCCCGG ACGTCCGGCG CCGGGGTTGG ACCTGGTGCG CGCGGTCGCC
GGGTGGGACG CGGCCCGCGC GAGTGCGGCG GGCGGCCCTG GCGGGCTTGG CGCGAGTGGC
GCGGGCAGGC CCGGCGCGGG TGCGCCCGGC GCGGGTGCGG CCCCTCCCGC ACGGCCGTGG
TTCGCCATCG GGGGGATCGA TCGGCATCGG CTTCCCGAAG TGATCTCCGC CGGGGCCCGC
CGGGTGGTGG TCGTGCGCGC CATCACCGAG TCGAGCGACC CCCGCGCGGC CGCCGCCTGG
TTGAAAATTC AACTAAGCGG CGTACCCTCG TCCCCGTGA
|
|---|
| Protein sequence | MPGLDATQIR RRLADARLYL CTPHRPDLAE FADAALAGGV DVVQLREKGM EARQELAALE
VLAEACARHG ALLAVNDRAD VALAAGADVL HLGQDDLPVP LARRVVGEEV VIGRSTHDVA
QASAAAVEPG VDYFCTGPCW PTPTKPGRPA PGLDLVRAVA GWDAARASAA GGPGGLGASG
AGRPGAGAPG AGAAPPARPW FAIGGIDRHR LPEVISAGAR RVVVVRAITE SSDPRAAAAW
LKIQLSGVPS SP
|
|---|
| |