| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0385 |
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| Symbol | |
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| ID | 8324544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 420623 |
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| End bp | 423445 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644940929 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003098198 |
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| Protein GI | 256374538 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGACC GGAGCAGGTG CGGTCTCGAG TTCGGCGTCC TCGGTCCGCT CAGGGTGGTC
GCGGACGGCG GGCCCATCGC GATCGGGCGC AGGGGGGTGC GGGCGCTGCT GGCGGTCCTG
GTCCTGGAGG CCAACCGGGT CGTGCCGATC GACGAGCTCG TCGACCGCCT GTGGGGCGAC
GAGCCGCCCG CGACGGCCAG GACCATCGTC CACGGCTACG TCTCGCGGCT GCGCAAGGTC
CTCGACGCGG CGGACCCGGC GGGCTCCGCG CGCATCCTCA CCACCCCGCC CGGCTACCAG
CTGGCCGTCG ACCCGTGGCG CCTCGACCAC CACCGCGCCC GCAGGCTGAT CTCCTCGGCG
CGCGGCAAGC CCGCCACGTC CAGGGCCCCG CTGCTGCGCG ACGCGCTGCG GCTGTGGCGC
GGCCCGGTGC TGGCCGACGT GCCCAACGCC CCCGGCAGCG ACCTGGCCGA GCTGCGCCTG
GTCGCCTTGG AGGAGCGGGC CGCCGCCGAG CTGGAACTGG GCCACCACCT GGAGGTCGTC
GGGGAGCTGC GCCAGCTGGT CGCCGAGCAC CCGTTCCGCG AGCGCCTGGT CGCCCAGGCC
GTCCTCGCCC TCTACCGCTC CGGCCGCCGC GCCGACGCCC TCGACGCCTA CCAGCGCTTC
CACCGCAGGC TCGTGGACGA GCTGGGCATC GACCCCGGCC CGGACCTGCG CGCCTTGCAC
GAGCGGGTGC TGCGCGACGA CCCGGCCCTG CTGCCCGCCA GGGCCCCCGA GACCCCCGGC
GTCGCGCCAC GTCCCGGCGT GGTCGTGCCC GCCCAGCTGC CCGCCGCCGC CAGCGGCTTC
GTCGGCCGCG ACGAGGAGCT GGCCTGGCTC GACCGGCTGT GCGACACCCG CGACCGGGAC
GCCACCACCA CCGCCGTCCT CGACGGGCCG CCCGGCATCG GCAAGAGCGA GCTGGCCGTC
GCCTGGGGCC ACCGCAGGGC CGCCCAGTTC CCCGACGGCC TGCTGTTCGC CCAGCTCGGC
GGGCACGCCG ACGACGAGCG CGCGCGGGTC GGCCCGGACG AGGTGCTGGC CAGGTTCCTG
CTCGCGCTGG GCGTCCCCGC CGACGCCGTG CCCAGGGGGA CGGCCGACCG GGTCGGCCTC
TACCGCTCCG TGCTGGCAGG CCGCCGCGTC CTGGTCGTGC TGGACGACGC CCGCGACGCC
GAGCACGTCC GCCTGCTCCT GCCGCCCGGC TCCGGCTCGC TCGCCCTGGT CACCAGCAGG
CTGCGCCTCG GCTCGCTGGT GGTCAGCGCG GGCGCCCGCG TGCTCACCCT GGACGTCCTC
GCCGAGGACG AGTCGGCCCG GCTGGTCGAC GAGGCCGTGG GCAAGCCGCT GTCCGAGCAG
GAGCCCGACG CGGTCCGCGA CCTGGCCCGG CTGTGCGGCA ACCTGCCGCT GGCGCTGCGG
ATCGCCGCCG CCAGGCTCGT CTCCAGTCCG GAGTGGGCGG TCGCGTCGCT GGTCGACGCG
CTCGCCGACG ACAGCACCCG CCTGCGCGCC CTCGACCTCG CCGACGCGGA CGCGGGCGGC
GGCGTCGGCG TGGCCCGCGC GCTCGCCCTG TCCTACCGGG AGCTGCCCGA CGAGCTGGCC
GAGGTGTTCC GCGCCGCCGG GCTGGTCCCC GGCCGCAGGG TCACCGCGCA GGCCGTCGCC
GCGCTGTGCC GGACCGACGC GGGCACGGCG GCCCGCCGCC TCGCCGAGCT GGCCGACGCG
CACCTGCTGC TGGAGCGCGG GCGCGGCGAC TACGCCCTGC ACGACCTGGT CCGCCTCTAC
GCCAGGGAGC TGCTCGCCGA CGTCCCGCCC GAGCGCACCG CCGCCGCCCT CGGCAGGCTC
CTGGACCACT ACCTCGCCGC GTGCGACCGG GCCCGCAGGC TGCTGCGCCC GGCCACCGAC
GGCCTCGACC CCGGCCAGTC CGACCACCGC GCCGCCCGCC CCGCCACGTC CGGCCAGGCG
CTGCTGTGGT TCGACAAGGA GTGGCCGAAC ATCGTCGCCC TGGCCAGGGC GGGCGCCGAG
CGCGGCCTGC ACCGCCGGGT GTGGCAGCTG GTCCGGCTCG TGCACACCCG CTGCGCGGTC
CGCGCGGTCG ACGACGGCTG GTCCGAGCTG GCCGCCATCG GGCTCGCCTC GGCCCGCGCC
GAGGGCGACC CGCGCGGCGA GGTGCTGGTG CTGCACGCCG CGCACAGCGT GGCGCTGCGC
ACCGGCCCGG CGCCCGGTCC GCTCGCGGAC GCCCGGCGGG CGCACCGGAT CGCCGAGGGC
CTCGGCGAGG CCCGCTACCT GGTGCTGGCG CTGGACCAGC TCGCCTCCGC GCTGCTGGCG
ACCGGCGAGA CCGGGGCGGC CATCACCCGC TACCGCGAGG CCGTCGAGGC GGCCCGGCGC
GACGGCGACG TGCTCGGCGA GGCGCACGTG CTCAACAACC TCGCCCAGGC CGAGCAGGCC
GCCGGGCGCA GGGAGACCGC GGCGCGCCAC CAGTTCCAGG CCGCGGAGCT GTTCCACCGC
ACCGGCGACC AGCGCGGCCA CGCCCTCGCG GTCGGCAACC TCGCCGAGCT GTACGCGGAG
CTGGACCTGC TGGTGGAGGC CGAGGAGAGC GCGAGGCAGG CCGTGCAGCT CGCGGTCGGC
GGGACCATGC GGTACGAGGA GGCGTTCGGC CGCCAGGTCC TCGGCGCGGT GCTGGCCCGG
CGCGGCGAGC GGTCGGCGGC GCGGGCCGAG CTGGTGGAGT CGCTGCGGCT GTTCGAGCGG
CTCGGCTCAC CGAGGGCGGC GTCGGTCCGG ATCGCGCTGG ACGGCCTCGG CGGGGTGTTT
TAG
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| Protein sequence | MGDRSRCGLE FGVLGPLRVV ADGGPIAIGR RGVRALLAVL VLEANRVVPI DELVDRLWGD
EPPATARTIV HGYVSRLRKV LDAADPAGSA RILTTPPGYQ LAVDPWRLDH HRARRLISSA
RGKPATSRAP LLRDALRLWR GPVLADVPNA PGSDLAELRL VALEERAAAE LELGHHLEVV
GELRQLVAEH PFRERLVAQA VLALYRSGRR ADALDAYQRF HRRLVDELGI DPGPDLRALH
ERVLRDDPAL LPARAPETPG VAPRPGVVVP AQLPAAASGF VGRDEELAWL DRLCDTRDRD
ATTTAVLDGP PGIGKSELAV AWGHRRAAQF PDGLLFAQLG GHADDERARV GPDEVLARFL
LALGVPADAV PRGTADRVGL YRSVLAGRRV LVVLDDARDA EHVRLLLPPG SGSLALVTSR
LRLGSLVVSA GARVLTLDVL AEDESARLVD EAVGKPLSEQ EPDAVRDLAR LCGNLPLALR
IAAARLVSSP EWAVASLVDA LADDSTRLRA LDLADADAGG GVGVARALAL SYRELPDELA
EVFRAAGLVP GRRVTAQAVA ALCRTDAGTA ARRLAELADA HLLLERGRGD YALHDLVRLY
ARELLADVPP ERTAAALGRL LDHYLAACDR ARRLLRPATD GLDPGQSDHR AARPATSGQA
LLWFDKEWPN IVALARAGAE RGLHRRVWQL VRLVHTRCAV RAVDDGWSEL AAIGLASARA
EGDPRGEVLV LHAAHSVALR TGPAPGPLAD ARRAHRIAEG LGEARYLVLA LDQLASALLA
TGETGAAITR YREAVEAARR DGDVLGEAHV LNNLAQAEQA AGRRETAARH QFQAAELFHR
TGDQRGHALA VGNLAELYAE LDLLVEAEES ARQAVQLAVG GTMRYEEAFG RQVLGAVLAR
RGERSAARAE LVESLRLFER LGSPRAASVR IALDGLGGVF
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