| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0355 |
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| Symbol | |
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| ID | 8324513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 384876 |
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| End bp | 386333 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644940900 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003098170 |
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| Protein GI | 256374510 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGAACA GTTTGCCCGA TCACGAACCG CCCACGACAC CGGGCGTGTC CGCCGGGCGG
AACTGGGAGC TCTGGTCCCT GCGACCGGCC GCGATCGCTT ACATCCTTTC CCTCGAATTG
GTGGTGTTGA TTTCCACCAT TTGGTTGATG GCCGGGGTGG GATCCGCCTC CGAGTCCGAC
TGGTTCCGGT TCGGGGCGTT CGCGGCGGCC GTGACGGTGC ACCTGACGAT CGTCCGGCGG
GCCGAGGAGT CGCGGCGGGA CGAGTCCGCG AGCCTGTACT TCGACCTCAC CTCGGTGTGG
ACGTTCGCCG CGGCGGTGGT GCTGCCCGCG CCGCTGGCGG TGCTGATCGT GCTGCTGCTG
CGCGTGGTCA CCCAGCCGAT CGCGCGACGG CAGCCCTACC GGTTCGTGTT CACCTCGACG
CACATCGTGG CCAGCACGGT GCTGGCCGGG GTCGCGGTGC GCGAGGCGGG CTTCCCGCTG
CTGGCCACCG GCCGGGTGCT GGGCGACCTG GGGCTGCTGG CGGTGCTGGC GCTGACCGCC
GCGCTGTACT GGTTCACCCA GGTGGTGCTG ATGACGGGCG TGCTGAAGAT CCTGAACCCG
CGCACCCGGT TCGCGGACAC GCTGGGCTCG CGCGGGGACA ACATGCTGGA GGCCACCACG
CTGGGCGTGG GCGCGCTGCT CGGGCTGCTG ACCGCGACGC ACTGGGCCGC GCCGCTGCTG
ATGGTGGTGC CGGTGGTGCT GGCGAACGCG CTGCTGCACC GGGCGTCGGA GCGGCAGGCG
CACCTGGAGC GGCTGCTGGC CGAGCAGGCG CAGGCGCACC AGCAGCTCAC CCAGGACGCG
CACACCGACT TCCGCACGGG CCTGCTGAAC ACGACCGGGC TCGCCGAGTT CGCGCACCGG
CTGGCCGAGC GGGGCCGCAT CGACGGCAAG CCGGTGACCG TGCTGGCGAT CGACCTGGAC
CACTTCAAGC GGATCAACGA CACCTGGGGG CACCCGGCGG GCAACGCGGT GCTGGCCGAG
GTGGGGCGCA TCCTGCGGGA GAAGCTGCGG CCGGGCGACG TGGCCGGTCG GGACGGCGGC
GAGGAGTTCG TGGTCGTGCT GGCCGACACC GGGCTGGCCG AGGGCACGGC GATCGCGGAG
CGGGTGCGGG AGGCGATCGG GCTGATGGTG GTGGTGACCA CCGACAAGCA CCGCAGCACG
GTGCACCTGC GCGGCCGGGA CCTGCCGGTG AACGAGGACG GGCAGGAGGT GCGGGCGATC
TCGGCGTCGA TCGGGGTCGC GGTGCTGGGC GAGGGCCCGG ACGCGCTGGC GCACGCGCAG
CACAGCGCCG ACGCGGCGCT GTACGCGGCG AAGGAGCGGG GCCGCAACCA GGTGCGGGTG
GCGAACGTGG ACATCGGCGG GCCGCGCCCG GCGGCGCTGG CCCGGTTGCA GGACCACGGG
GTGCCGCGCA CGGCCTGA
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| Protein sequence | MANSLPDHEP PTTPGVSAGR NWELWSLRPA AIAYILSLEL VVLISTIWLM AGVGSASESD
WFRFGAFAAA VTVHLTIVRR AEESRRDESA SLYFDLTSVW TFAAAVVLPA PLAVLIVLLL
RVVTQPIARR QPYRFVFTST HIVASTVLAG VAVREAGFPL LATGRVLGDL GLLAVLALTA
ALYWFTQVVL MTGVLKILNP RTRFADTLGS RGDNMLEATT LGVGALLGLL TATHWAAPLL
MVVPVVLANA LLHRASERQA HLERLLAEQA QAHQQLTQDA HTDFRTGLLN TTGLAEFAHR
LAERGRIDGK PVTVLAIDLD HFKRINDTWG HPAGNAVLAE VGRILREKLR PGDVAGRDGG
EEFVVVLADT GLAEGTAIAE RVREAIGLMV VVTTDKHRST VHLRGRDLPV NEDGQEVRAI
SASIGVAVLG EGPDALAHAQ HSADAALYAA KERGRNQVRV ANVDIGGPRP AALARLQDHG
VPRTA
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