Gene Amir_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0309 
Symbol 
ID8324467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp338032 
End bp339045 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content76% 
IMG OID644940854 
Producthypothetical protein 
Protein accessionYP_003098124 
Protein GI256374464 
COG category[S] Function unknown 
COG ID[COG5282] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03624] putative hydrolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTCAGC AGGACCGGGC GGCGTCGATC GACTGGGAGG TCGCCGTCTC CACGGCGGCC 
CGCCTGGTCC GCCCCGGACC GGTGGTGCCC AGGGCCGAGG CCGACGTCGC GGTCGGCAGG
CTGCGCGAGC TGGCGGTGGA CGCCGAGGCG CACGTCCGGG AGCTGACGGG CCTCGGCCAC
GGGCTGCCGC TGCGCGCGGG CGAGGTCGTC GACCGGCCGG GCTGGGTGCG CGCCGCGGCC
CAGGGGCTGT CGGTGCTCAC CGACAGCGCC GCGCCCCGGC AGGGCGGCGT GCTCAGCGGG
GTCGTGTCGG GCACGGCGGG GGTGCAGGCG GGCGTGGTGC TCGCGTTCCT CAGCTCCCGC
GTGCTCGGCC AGTACGACCC GTTCTCCGGC GACGGCAGGC TGCTGCTGGT CGCCCCGAAC
ATCGTCGGCA CCCAGCGCGC GCTGAACGTG CCCGGCGAGG ACTTCAGCAT GTGGGTGTGC
CTGCACGAGT GCACCCACCG GCTCCAGTTC ACCGGCGTCC CGTGGCTGGC CGGGCACTTC
TCCGGCCTGG TCACCGAGCT GCTGGAGAGC ATGGACAACG AGTCGCCCCG GCTGCGCGAC
CTGCCCAAGC GGCTGCGCGA GGCGGACGGG CCGGTCGGGC TGATCGAGCT GTTCCAGACG
CCCGAGCAGC GCGCCGCGCT CGACCGGCTG ATCGCGGTGT CCACCCTGCT GGAGGGGCAC
GCCGACCACG TCATGGACGC GGTCGGGCCG GACGTGGTGC CGTCCGTCGC GGTGATCCGG
CGGCGGTTCA CCGACCGGCG CTCCGGGGGT GGGCTGCTGG ACCGGGTGCT GCGCTCGCTG
CTGGGCGTGG AGGCCAAGGT CAGGCAGTAC GCGGAGGGCG CCGCGTTCAC CAGGCACGTG
GTGGACGAGG TCGGCATGAC CGGGTTCAAC GCGGTGTGGA GCGCCCCCGA GGCGCTGCCG
ACCCGCGCCG AGATCGCCGA CCCCGCCGCC TGGCTGCGCC GCGTCGCGCC GTGA
 
Protein sequence
MTQQDRAASI DWEVAVSTAA RLVRPGPVVP RAEADVAVGR LRELAVDAEA HVRELTGLGH 
GLPLRAGEVV DRPGWVRAAA QGLSVLTDSA APRQGGVLSG VVSGTAGVQA GVVLAFLSSR
VLGQYDPFSG DGRLLLVAPN IVGTQRALNV PGEDFSMWVC LHECTHRLQF TGVPWLAGHF
SGLVTELLES MDNESPRLRD LPKRLREADG PVGLIELFQT PEQRAALDRL IAVSTLLEGH
ADHVMDAVGP DVVPSVAVIR RRFTDRRSGG GLLDRVLRSL LGVEAKVRQY AEGAAFTRHV
VDEVGMTGFN AVWSAPEALP TRAEIADPAA WLRRVAP