Gene Amir_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0228 
Symbol 
ID8324384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp254024 
End bp254854 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content78% 
IMG OID644940773 
ProductMethyltransferase type 11 
Protein accessionYP_003098045 
Protein GI256374385 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.592244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCCCG CGACCCCGCC CCAGGCCCCT GCCCCCGACC ACCGCGCCGA CCACCGCGCC 
GAGCTGCGCC GCGCCTACGC CACCGGCGAG CTCGCCGGGC TCCCCGTGTT CGGGGGCGGC
TTCATCAACT TCGGCTTCTG GCGGGGCATC CCCCTCCACG GCCCGCTGTC CGCCGAGGAC
CGCGTCGCCT CCCAGGCCGC CCTCTACGAC CTCGTGCTCG ACGCCCTCTC CCCCACCGGC
CGCAGCACCC TGGAGATCGG GTGCGGGCAG GGGGTGGGCG CGCTGCGGGT GCTGCTCCGG
GCGCCCTCCC GGTGCGCCGG GGTCGACCAG GAGCCCGAGC AGGTCGGGCG GGCCCGCCTG
GCGGCGCCCG AGGGGGAGTT CGCGGTCGGG TCGGCGGGGG CGCTGCCGTT CGGGGACGGC
GAGTTCGAGC GCCTGCTGTC GGTGGAGGCC GCGCAGCACT TCGACGACCT CGGCGCGTTC
GCCCGCGAGG CGGCCCGCGT GCTCTCCCCC GGCGGTCGGT TGGCCGTCGC CACGTTCTTC
GCCGCCGACG CCTCCGCGGC GCCCGAGCTG TCCCGGCTGC TGGCCACGTT CGCCCGCGGC
CTCGACCTGC CCCACCCGAT CGGGGGCTTC CTTGACCGGT TGCGCGAGGC CGGGTTCGGC
GACGTGGCGG CCACGAGCGT GGGCGAGCAC GTGTGGCGCG GCCTGGACCG CTGGCTGGAG
CTGGGGCCCG CGCCCGAGCG GTGGGACCGC AACTGGTTGG TCGCCGCCGA GCGGGGGCTG
CTGGACTACC ACCTGGTCAC CGCGACCAAG CCGGCAGGAT CGGGGGTGTG A
 
Protein sequence
MDPATPPQAP APDHRADHRA ELRRAYATGE LAGLPVFGGG FINFGFWRGI PLHGPLSAED 
RVASQAALYD LVLDALSPTG RSTLEIGCGQ GVGALRVLLR APSRCAGVDQ EPEQVGRARL
AAPEGEFAVG SAGALPFGDG EFERLLSVEA AQHFDDLGAF AREAARVLSP GGRLAVATFF
AADASAAPEL SRLLATFARG LDLPHPIGGF LDRLREAGFG DVAATSVGEH VWRGLDRWLE
LGPAPERWDR NWLVAAERGL LDYHLVTATK PAGSGV