Gene Amir_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0171 
Symbol 
ID8324320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp186174 
End bp186656 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content78% 
IMG OID644940710 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003097988 
Protein GI256374328 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.681165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCACCG CGCCGTACGA CGCGATGGTC GGCGCCGCCC TGGAGGCGGC GGCGGGCGCG 
GGCGAGGACA TCCCGATCGG CGCGGCGGTC TTCGGCCCGG ACGGCGCGGA GCTGGCGCGG 
GCCTGCAACG CGCGCGAGCG CCTGGGCGAC CCGACCGCGC ACGCCGAGGT CCTGGCCCTG 
CGCGCGGCGG CGGCGGTCTT CGGCGACGGC TGGCGGCTGG GCGGCTGCAC CCTGGCGGTG 
ACGGTCGAGC CGTGCGCGAT GTGCGCGGGC GCCCTGGTGC TGGCGCGGGT GGACCGCGTG 
GTGTTCGGCG CGTGGGAGCC GAAGACGGGC GCGGCGGGCT CCCTGTGGGA CGTGGTCCGC 
GACCGCAGGC TCAACCACCG GGCCGAGGTG GTCGGCGGGG TCCGCGAGGC CGAGTGCGCG 
GCGCTGATGC GGGACTTCTT CGCAGGTCGG GACACGTCCG AACGGTGGCC GGAGAGCGGC 
TGA
 
Protein sequence
MITAPYDAMV GAALEAAAGA GEDIPIGAAV FGPDGAELAR ACNARERLGD PTAHAEVLAL 
RAAAAVFGDG WRLGGCTLAV TVEPCAMCAG ALVLARVDRV VFGAWEPKTG AAGSLWDVVR 
DRRLNHRAEV VGGVREAECA ALMRDFFAGR DTSERWPESG