Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0156 |
Symbol | |
ID | 8324305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 171267 |
End bp | 172106 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644940695 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003097973 |
Protein GI | 256374313 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1087] UDP-glucose 4-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCCCA TGCGGGTATT GGTCACGGGC GCACGGGGTT ATGTCGGCCG CGCGGTGGCG GCGGAGTTGT CCGGAGCGGG GTGCGAGGTG GTCCCGCTGG GGTGCGACGT GCGCTCCCCC GAGGCGCGGG ACGCGGCGCG GTCGGTCGAC GCGGTGGTGC ACCTGGCCGC GCTGGCGCGG GTGCGCGAGT CGTTCGAGCG GCCACTGGAC TACTTCGACG TGAACGTGGC GGGCACCGCG AACCTGCTGC GCGCCGAACC CGCCCGGTTC GTGCTCGCCT CCACGGCCGG GGTGTACGGC GCGCCGGGCG TCCCGGTGCT GTCCGAGGAC GTGCCGCGCG CGCCCGCGAG TCCTTACGCC GCCTCGAAGG CCGCCGCCGA GGACCTGGTG CGCTGGGCCG CGCCGGGCGG GGTGGTGCTG CGGCTGTTCA ACGTCGCGGG CGGCGGCGAC CGGGACGACA CGCGGATCGT CACCAGGGCG TGCGCGGCGG CGTCCGGGCG GCTCGGGCCG CTGGCGGTGT ACGGCGACGG CGGCGCGGTG CGGGACTTCG TGCACGTGCG GGACGCGGCG CGGGCGTTCC TGGTCGCGCT CGGACTGGAC GGCGGGGTGT TCAACGTGGG CGCGACGGCG GCGAGCGTGG CCGACGTGGT GGCCGCCGTG GAGCAGGTCG CCGGGCGACC GCCGGCCGTC GAGCACCACC CGGCGCACCC CGGCGAGGTG CGGGAGCTGC GGTCGGACTC GGCGCGGCTG CGCGCGGCCG GGTGGGCTCC GGAGCGGTCC GGGCTGGTCG AGCTGGTGCG CGACCAGTGG CTCAGCGAGT CCGCCGCCGG GTCGCGCTGA
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Protein sequence | MSPMRVLVTG ARGYVGRAVA AELSGAGCEV VPLGCDVRSP EARDAARSVD AVVHLAALAR VRESFERPLD YFDVNVAGTA NLLRAEPARF VLASTAGVYG APGVPVLSED VPRAPASPYA ASKAAAEDLV RWAAPGGVVL RLFNVAGGGD RDDTRIVTRA CAAASGRLGP LAVYGDGGAV RDFVHVRDAA RAFLVALGLD GGVFNVGATA ASVADVVAAV EQVAGRPPAV EHHPAHPGEV RELRSDSARL RAAGWAPERS GLVELVRDQW LSESAAGSR
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