Gene Amir_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0156 
Symbol 
ID8324305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp171267 
End bp172106 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content78% 
IMG OID644940695 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003097973 
Protein GI256374313 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCCA TGCGGGTATT GGTCACGGGC GCACGGGGTT ATGTCGGCCG CGCGGTGGCG 
GCGGAGTTGT CCGGAGCGGG GTGCGAGGTG GTCCCGCTGG GGTGCGACGT GCGCTCCCCC
GAGGCGCGGG ACGCGGCGCG GTCGGTCGAC GCGGTGGTGC ACCTGGCCGC GCTGGCGCGG
GTGCGCGAGT CGTTCGAGCG GCCACTGGAC TACTTCGACG TGAACGTGGC GGGCACCGCG
AACCTGCTGC GCGCCGAACC CGCCCGGTTC GTGCTCGCCT CCACGGCCGG GGTGTACGGC
GCGCCGGGCG TCCCGGTGCT GTCCGAGGAC GTGCCGCGCG CGCCCGCGAG TCCTTACGCC
GCCTCGAAGG CCGCCGCCGA GGACCTGGTG CGCTGGGCCG CGCCGGGCGG GGTGGTGCTG
CGGCTGTTCA ACGTCGCGGG CGGCGGCGAC CGGGACGACA CGCGGATCGT CACCAGGGCG
TGCGCGGCGG CGTCCGGGCG GCTCGGGCCG CTGGCGGTGT ACGGCGACGG CGGCGCGGTG
CGGGACTTCG TGCACGTGCG GGACGCGGCG CGGGCGTTCC TGGTCGCGCT CGGACTGGAC
GGCGGGGTGT TCAACGTGGG CGCGACGGCG GCGAGCGTGG CCGACGTGGT GGCCGCCGTG
GAGCAGGTCG CCGGGCGACC GCCGGCCGTC GAGCACCACC CGGCGCACCC CGGCGAGGTG
CGGGAGCTGC GGTCGGACTC GGCGCGGCTG CGCGCGGCCG GGTGGGCTCC GGAGCGGTCC
GGGCTGGTCG AGCTGGTGCG CGACCAGTGG CTCAGCGAGT CCGCCGCCGG GTCGCGCTGA
 
Protein sequence
MSPMRVLVTG ARGYVGRAVA AELSGAGCEV VPLGCDVRSP EARDAARSVD AVVHLAALAR 
VRESFERPLD YFDVNVAGTA NLLRAEPARF VLASTAGVYG APGVPVLSED VPRAPASPYA
ASKAAAEDLV RWAAPGGVVL RLFNVAGGGD RDDTRIVTRA CAAASGRLGP LAVYGDGGAV
RDFVHVRDAA RAFLVALGLD GGVFNVGATA ASVADVVAAV EQVAGRPPAV EHHPAHPGEV
RELRSDSARL RAAGWAPERS GLVELVRDQW LSESAAGSR