Gene Amir_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0128 
Symbol 
ID8324274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp138200 
End bp139384 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content67% 
IMG OID644940664 
ProductUDP-galactopyranose mutase 
Protein accessionYP_003097945 
Protein GI256374285 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCTTCG CTGGATTTGA TCTGATCGTC GTCGGTTCCG GTTTCTACGG CCTCACGGTC 
GCCGAGCGCG CCGCGTCTCA GCTCGGCAAG CGCGTCCTGG TCCTGGAGCG CCGCGACCAC
ATCGGTGGAA ACGCCTACTC CGAGGCCGAG CCCGAGACGG GCATCGAGGT GCACCGCTAC
GGGGCGCACC TGTTCCACAC CTCCAACAAG CGGGTGTGGG ACTACGTCAA CCAGTTCACC
GAGTTCACCG GCTACCAGCA CCGCGTGTTC GCCATGCACG ACGGCACCGC GTACCAGTTC
CCGATGGGCC TCGGCCTGAT CACCCAGTTC GTCGGCAAGT ACCTGTCGCC GGACGAGGCG
CGGGCGTGGG TCGCCGAGCA GGCGGCGGAG ATCGACGCCA AGGACGCCAC GAACCTGGAG
GAGAAGGCGA TCTCGCTGAT CGGCCGCCCC CTCTACGAGG CGTTCGTGCG CGACTACACC
GCCAAGCAGT GGCAGACGGA CCCGAAGGAG CTGCCCGCCG CGGTCATCAG CCGCCTGCCG
GTGCGCTACA ACTTCGACAA CCGCTACTTC AACGACACCT ACGAGGGCCT GCCGGTCGAC
GGCTACACCG CCTGGCTGCA GAAGATGGCC GACCACGAGA ACATCGAGGT CCGCCTGGGC
ACGGACTTCT TCGACGTCCG CGCCGACATC CCCGAGGGCA CCCCGGTCGT CTACACCGGC
CCGGTCGACC GGTACTTCGA CTACTCCGAG GGCTGGCTGG GCTGGCGCAC GCTGGACTTC
GAGATGGAGG TCCTGAACAC CGGGGACTTC CAGGGCACGC CCGTCATGAA CTACAACGAC
GCGGACGTCC CCTACACCCG CATCCACGAG TTCCGGCACT TCCACCCGGA GCGCGAGTAC
CCGGCCGACA AGACGGTCAT CGTCCGCGAG TTCTCCCGCT CCGCGGAGAA GGAGGACGAG
CCGTACTACC CGATCAACAC GGCCGAGGAC CGCGCCAAGC TGGAGAAGTA CCGCGAGCTG
GCGAAGAAGG AGGCCTCCGA GCACAACGTG CTGTTCGGCG GTCGCCTGGG CACCTACAAG
TACCTCGACA TGCACATGGC GATCGGCGCG GCGCTGACCG CGTTCGACAA CAAGATCGCC
CCGCACCTGA CCGAGGGCAA GGCGCTCGAC GGCTCCCTGG ACTGA
 
Protein sequence
MSFAGFDLIV VGSGFYGLTV AERAASQLGK RVLVLERRDH IGGNAYSEAE PETGIEVHRY 
GAHLFHTSNK RVWDYVNQFT EFTGYQHRVF AMHDGTAYQF PMGLGLITQF VGKYLSPDEA
RAWVAEQAAE IDAKDATNLE EKAISLIGRP LYEAFVRDYT AKQWQTDPKE LPAAVISRLP
VRYNFDNRYF NDTYEGLPVD GYTAWLQKMA DHENIEVRLG TDFFDVRADI PEGTPVVYTG
PVDRYFDYSE GWLGWRTLDF EMEVLNTGDF QGTPVMNYND ADVPYTRIHE FRHFHPEREY
PADKTVIVRE FSRSAEKEDE PYYPINTAED RAKLEKYREL AKKEASEHNV LFGGRLGTYK
YLDMHMAIGA ALTAFDNKIA PHLTEGKALD GSLD