Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4277 |
Symbol | |
ID | 8255413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 5155639 |
End bp | 5156253 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644937943 |
Product | ABC transporter related |
Protein accession | YP_003094530 |
Protein GI | 255534158 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0483336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCA GCTTGCAGAA CGTTGGCAGA AGGTTTAATC AGGAATGGAT TTTCAGAGGG CTGGATTATA CCTTCAATTC TGCCGGAAAA TACGCTGTGC TGGGTCCAAA CGGTTCTGGT AAGTCTACTT TGCTAAGTGT TTTATTGGGC AATCTTGGCC CTTCTGAGGG GAAGGTGGTT TATGAGGACG GAGCAGTTGT TCCTGTAGCA GCTATTTATA AGTACATCAG CTTTGCAGCG CCCTATTTAG ACCTGATAGA GGAGTTTACG CTTCAGGAGA CCATAGATTT TCATTTTAAG GTTAAGGGTT TTCATGCAGG AATGGATGCG GCAGCAGTAC TTGAGTTATT GGGGCTTTCG AAAGCTCAGG ACAAGGCCTT AAAATACTTT TCTTCGGGGA TGAAGCAGCG TACGAAGCTT GTACTGGCCT GCTGCGCAGA CACGCCTCTG CTTTTTTTAG ATGAGCCGAC CTCTAACCTC GACAAGCAGG GGCTGGCCTG GTACCTGGAG CTGATTGAGC GTTTTGCCTT GAACAGGACG CTGATTATAG GCTCAAATCA GGAGGTTGAA TATTCTTTTT GTAACCATTT TGTGCAGTTG ACGGATTATA AATAA
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Protein sequence | MTISLQNVGR RFNQEWIFRG LDYTFNSAGK YAVLGPNGSG KSTLLSVLLG NLGPSEGKVV YEDGAVVPVA AIYKYISFAA PYLDLIEEFT LQETIDFHFK VKGFHAGMDA AAVLELLGLS KAQDKALKYF SSGMKQRTKL VLACCADTPL LFLDEPTSNL DKQGLAWYLE LIERFALNRT LIIGSNQEVE YSFCNHFVQL TDYK
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