Gene Phep_4277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4277 
Symbol 
ID8255413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5155639 
End bp5156253 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content46% 
IMG OID644937943 
ProductABC transporter related 
Protein accessionYP_003094530 
Protein GI255534158 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0483336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA GCTTGCAGAA CGTTGGCAGA AGGTTTAATC AGGAATGGAT TTTCAGAGGG 
CTGGATTATA CCTTCAATTC TGCCGGAAAA TACGCTGTGC TGGGTCCAAA CGGTTCTGGT
AAGTCTACTT TGCTAAGTGT TTTATTGGGC AATCTTGGCC CTTCTGAGGG GAAGGTGGTT
TATGAGGACG GAGCAGTTGT TCCTGTAGCA GCTATTTATA AGTACATCAG CTTTGCAGCG
CCCTATTTAG ACCTGATAGA GGAGTTTACG CTTCAGGAGA CCATAGATTT TCATTTTAAG
GTTAAGGGTT TTCATGCAGG AATGGATGCG GCAGCAGTAC TTGAGTTATT GGGGCTTTCG
AAAGCTCAGG ACAAGGCCTT AAAATACTTT TCTTCGGGGA TGAAGCAGCG TACGAAGCTT
GTACTGGCCT GCTGCGCAGA CACGCCTCTG CTTTTTTTAG ATGAGCCGAC CTCTAACCTC
GACAAGCAGG GGCTGGCCTG GTACCTGGAG CTGATTGAGC GTTTTGCCTT GAACAGGACG
CTGATTATAG GCTCAAATCA GGAGGTTGAA TATTCTTTTT GTAACCATTT TGTGCAGTTG
ACGGATTATA AATAA
 
Protein sequence
MTISLQNVGR RFNQEWIFRG LDYTFNSAGK YAVLGPNGSG KSTLLSVLLG NLGPSEGKVV 
YEDGAVVPVA AIYKYISFAA PYLDLIEEFT LQETIDFHFK VKGFHAGMDA AAVLELLGLS
KAQDKALKYF SSGMKQRTKL VLACCADTPL LFLDEPTSNL DKQGLAWYLE LIERFALNRT
LIIGSNQEVE YSFCNHFVQL TDYK