| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4274 |
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| Symbol | |
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| ID | 8255410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 5152255 |
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| End bp | 5153961 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644937940 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_003094527 |
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| Protein GI | 255534155 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.24355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT TAATATTAAT GGTAATGGCA GTAGTATTGA GCAGCCTTAC CTGGGCACAA
AACAGGCCGG ATTCGACGGC AAGCAACGGG GGAAGACTTC AGGTTTCTGC TTTTGGTGGC
CTTAGCATGC CCCTCGGCAA ATATAAAAAT GAGATCGGCA GGGCCAAAAA CGGTTATTTT
GCCGGATTGG CTATAGACCA GTACTTCAAA GGGAACAAGT GGGGTATAGG CCTGGACGCA
CGTTTTCTGA ACCATGAGAT GCGCAAGTTT GACAGCGTGT TTTTTGCCAA TGGGCATATT
GCTACAGCTT ATAAAAACCA TCCTTCTTTT CAGCACATTG CCCTAAGTGT GGGCCCTACT
TATAAAGTGG GTTTTGGTAA GCTTGATTTT GAGGCATTTT TACGCGGAGG GGTATTGTTT
GAGGGCTTTC CGCAGTATAC ACAGTCCATT TATGTAAATG CTGCTTCAGG CCCCCCGGTA
AAAACATTCG ACAATTATTA CACCAGCAAT TCGAAAGAAA AAACCAAATC CTGGATGGGA
CTGGGAGGTT TGCGGCTGTC ATATGGCCTT GGGGATCATT TGGCTTTGTT TGTACAGGCC
GACTACCTGC GGGCCTTTGG TAAAAGCTTT GGCAGCGACT CCAGTGAATT TTACATCACC
CGCTATAGTG AAAAGAAAGC CATTACCGCA ACCGATGTCA TGAATGTAAA AAGCGGACAG
ATCACCAACA TACTTGATTT CTATGAAGAA AAACCGGTTA CTCAAAAAAC TTTTGTACAG
GCCGTAAATG TGGGCCTGGG GATTAAATAT ACTTTTGGTG GCAAACGTAA AATTGCTGCG
CCTGTTCCTG TTACCAAAAC CCTAGCGCCA CCCGCTTCCG CAGTGCCTAA AGACATTCTG
GTGGTGGTAA AGGACAGGCA AACAGGCCTT GCTTTAAGCG GCGTTACCCT TAAGATCAGC
CATAAGGGGG TAGACCATAC TTCCATCAGC AATGCCGAAG GACAGGCAGA GCGCATTAAA
GGCGCTGAAA AAGGCAGTTA CCAGGTTACA GCCGTAAAAA ATGGAATTGC TGCTGAACCT
GTGGCCATCA CTGCGTCTGA CTTCGATAAG GCAGGAAATG TGATCTATAA AGAGATTTAT
CATGATGATC CCCGTTTTAC GCTGATCGGG GAAACGGTAA GGGCAAATGA CAATGCGAAA
CTGCCGGGAA TTGGTACGGT GCTGACCAAT GCATCTAACA GTACCAATAT GACCCAGATC
TCGGATGCGG AAGCTAAATT TGTTTACCAG CTGGAACAGC AATCGGATTA TAATATTGTC
GCCAATCAGG CCGGTAAATT CTCGCAGACA GAAAGTGTGA GCACCAAAGG GCTGGACAGG
AGTAAAACAT TGTATGTAAC CCTGAAACTT GGGGTAAGTA ACCTGGATGC CGGAACGGTA
TTTGTACTGA AAAATATCCA TTATGACTTT GACAAATCGA ACATCAGGCC AGATGCCGGA
AGGATACTTG ACAACCTGCT GAACGTCATG TCACAAAACC CAACCTTGAA GATCGAGTTG
TCGTCGCATA CCGACAGCAG GGGTAAGGAT GCCTATAACC TGCGCCTTTC GCAACAAAGG
GCAGAAGCTG CGGTAAATTA CCTGGTGGGC AAAGGTGTGG CGCGTGACAG GATGGTAGCC
AAAGATATGG AGAAACAAGA TTGCTGA
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| Protein sequence | MKKLILMVMA VVLSSLTWAQ NRPDSTASNG GRLQVSAFGG LSMPLGKYKN EIGRAKNGYF
AGLAIDQYFK GNKWGIGLDA RFLNHEMRKF DSVFFANGHI ATAYKNHPSF QHIALSVGPT
YKVGFGKLDF EAFLRGGVLF EGFPQYTQSI YVNAASGPPV KTFDNYYTSN SKEKTKSWMG
LGGLRLSYGL GDHLALFVQA DYLRAFGKSF GSDSSEFYIT RYSEKKAITA TDVMNVKSGQ
ITNILDFYEE KPVTQKTFVQ AVNVGLGIKY TFGGKRKIAA PVPVTKTLAP PASAVPKDIL
VVVKDRQTGL ALSGVTLKIS HKGVDHTSIS NAEGQAERIK GAEKGSYQVT AVKNGIAAEP
VAITASDFDK AGNVIYKEIY HDDPRFTLIG ETVRANDNAK LPGIGTVLTN ASNSTNMTQI
SDAEAKFVYQ LEQQSDYNIV ANQAGKFSQT ESVSTKGLDR SKTLYVTLKL GVSNLDAGTV
FVLKNIHYDF DKSNIRPDAG RILDNLLNVM SQNPTLKIEL SSHTDSRGKD AYNLRLSQQR
AEAAVNYLVG KGVARDRMVA KDMEKQDC
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