| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4225 |
|---|
| Symbol | |
|---|
| ID | 8255361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 5102153 |
|---|
| End bp | 5103337 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644937891 |
|---|
| Product | PUA domain containing protein |
|---|
| Protein accession | YP_003094478 |
|---|
| Protein GI | 255534106 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.731484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATG TAATCCTAAA AAAAGGCAAA GAAAAAGCCG CTATGCTCCG TCACCCCTGG
ATCTTTTCTG GTGCAATTGA TAAAATAAAG GGAAATCCTG AAAATGGAGA AGTGGTAACC
CTAAGGTCAG CAGCAAAAGA ATTTCTGGCC TATGCCTATT ACAACGATCA ATCCCGGGTA
GCCCTTCGTT TGCTCGAATG GGATGAAAAT ACCACGATAA ACAAGTCCTG GTACCGGGAA
AAACTCAAAG CCGCCATCGC CTCAAGGGAC CATGTATTAA ACGAAAATAC CAATACCTGC
AGACTGGTAT TCAGTGAAGC AGATTTTTTA CCTGGCCTGA TCGTAGATAA ATATGCCGGC
TTTCTTTCCC TGCAAATATT AAGTGCAGGC ATGGAAAGCA TAAAAGCAAC ACTTATCGAG
CTCCTCAGGG AATTGCTAAA CCCAACAGGG ATATTCGATA AAAGTGATGC CGGCGCACGT
AAACATGAAA ACCTCGAAGC TACACAAGGT CTTTTATGGG GAGAAACCCC TCCTGAATTT
ATTGAAGTAA AAGAAAACGG CATTCTTTAC CACATCAACA TTGCCGATGG CCAGAAGTCA
GGCTTCTATT GCGACCAGCG CGACAACCGG AAAATCCTGG CTGATTACAC CAGGGGCAAA
TCCGTTCTGG ATTGTTTCTG CTACAGCGGA GGATTTACCT TAAACAGCCT GAAATCCGGT
GCCGCATCCG TTACCAGCGT AGACAGTTCT GCACTGGCCA TTGAAACCCT GCAGCACAAT
CTGGAACTGA ACGGTTTTAA AGGATCCAAT CAGCATAGCA TACAATCTGA TGTCAACAAG
CAACTGCGCA TTTTTAAAGA CGAAGGAAAA ACCTTTGATG TATTGGTGTT AGACCCGCCA
AAATACGCGC CTTCAAGATC CGCACTGGAC CGGGCAGCAA GGGCTTACAA AGACCTGAAC
AGGCTTGGCA TGCTCCTGCT TAAAAAAGGG GGCATCCTGG CTACATTTTC CTGCTCCGGA
GCAGTAGACA TGGAAACCTT TAAACAGATC ATTGCATGGG CCGCATTGGA TGCAGGCCGC
GAAGTACAGA TCATCAGACA GTTCTGTCAG CCTGAAGACC ACCCGGTAAG TCTTTCTTTC
CCTGAAGGAG AATATCTAAA AGGATTATTG CTAAGGATAC TTTAA
|
|---|
| Protein sequence | MIDVILKKGK EKAAMLRHPW IFSGAIDKIK GNPENGEVVT LRSAAKEFLA YAYYNDQSRV
ALRLLEWDEN TTINKSWYRE KLKAAIASRD HVLNENTNTC RLVFSEADFL PGLIVDKYAG
FLSLQILSAG MESIKATLIE LLRELLNPTG IFDKSDAGAR KHENLEATQG LLWGETPPEF
IEVKENGILY HINIADGQKS GFYCDQRDNR KILADYTRGK SVLDCFCYSG GFTLNSLKSG
AASVTSVDSS ALAIETLQHN LELNGFKGSN QHSIQSDVNK QLRIFKDEGK TFDVLVLDPP
KYAPSRSALD RAARAYKDLN RLGMLLLKKG GILATFSCSG AVDMETFKQI IAWAALDAGR
EVQIIRQFCQ PEDHPVSLSF PEGEYLKGLL LRIL
|
|---|
| |