| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4204 |
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| Symbol | |
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| ID | 8255340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 5083164 |
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| End bp | 5083982 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937870 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_003094457 |
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| Protein GI | 255534085 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00182559 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT TTAAAGGCAG GGTTGCCATT TTGGGAAGTG GAAATATTGG TGTTTCTTTA
GCAAAAGGCC TGGTTAAATC GGGTTATGCC GAAGCCGGAC AGATCAGTTT AACAAGAAGA
AGTGCTGCTG GTTTAACCGA TCTGGCAGAA CAGGGCTTTG CGGTAAGTAC AGACAATGCC
GCGGTAGTTG CCAATGCAGA TATTGTTGTT TTAGCTGTAC TGCCACAACA ATTGAACAAT
TTGCTGGCAC AGATAGGAGC GGTGGTTGAT GTGCAGAAAC ACGTGTTTAT TTCAGTTGCC
TCGGGGGTAA GCTGTGCAGA TATCAGGAGT AAAATAGGCG AGGATGTACA GGTGGTAAGG
GCCATGCCAA ATACGGCCAT TGCCATTGGA CAATCTATGA CCTGTGTGGC AACGGATAAT
GCAAGTCAGC AAAATGTGGA AGAGGTAACC CGTATGTTTG AAACAGTAGG GTCTGTAGTT
AAAATTAATG AAGACCTGAT GACTTCTGCT ACGGCATTGT GTGCCTGTGG TATTGCCTTC
TTTTTACGGG CCATCAGGGC GGCCTCACAA GGAGGAGTAG AAATTGGTTT TCATGCAGAT
GAGGCGCTGA AAATGGCTGT GCAAACAGCG AAAGGTGCGG CAGATCTGCT TTTGCTGATG
CAATCACACC CCGAGCAGGA AATAGATAAG GTAACTTCAC CTAAGGGCTG TACCATTGCT
GGATTGAACG AAATGGAACA CAATGGATTT AGTTCTTCCT TAATTAAGGG GATTAAGCTC
TCGGCAATTA AAGCCGGTGC TTTATATACA AAAGAATAA
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| Protein sequence | MNKFKGRVAI LGSGNIGVSL AKGLVKSGYA EAGQISLTRR SAAGLTDLAE QGFAVSTDNA
AVVANADIVV LAVLPQQLNN LLAQIGAVVD VQKHVFISVA SGVSCADIRS KIGEDVQVVR
AMPNTAIAIG QSMTCVATDN ASQQNVEEVT RMFETVGSVV KINEDLMTSA TALCACGIAF
FLRAIRAASQ GGVEIGFHAD EALKMAVQTA KGAADLLLLM QSHPEQEIDK VTSPKGCTIA
GLNEMEHNGF SSSLIKGIKL SAIKAGALYT KE
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