Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4203 |
Symbol | |
ID | 8255339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 5082065 |
End bp | 5083147 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644937869 |
Product | peptidase M20 |
Protein accession | YP_003094456 |
Protein GI | 255534084 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0267175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGCG ATTTATTTAA GGAAAGTATT AAGAGGGATG CGGTAGAATT ATTGAAACAA TTGATCAGCA TCCCATCTTT CAGTAAAGAA GAAGATAAGA CCGCAGATGC AATTGAGGCT TTCCTGCAGC AGCGGAATAT AAAAACACAC CGTAAGCTGA ACAACATCTG GGCATACAAC AAATATTTTG ATGCGGCTAA GCCAACCCTG CTCTTAAATT CACATCATGA TACCGTGAAG CCAAACTCGG GCTATACGCG CGATCCTTAC GCGGCTACAG TGGAAGATGA CAAATTGTAT GGGCTGGGTA GTAATGATGC CGGAGGCTGC CTGGTATCGC TTATAGCAAC CTTTCTTTAT TATTATGATC AGGAAGGTTT AAATTATAAC ATCTGTCTGG CTGCTACAGC TGAAGAAGAG ATTTCAGGCA ACAATGGCCT GGAATGCATA CTGCCCGACC TTGGGGAGCT GGAATTTGCC ATTGTAGGAG AGCCTACCCT GATGAACCTG GCCATTGCAG AACGGGGTTT GCTGGTGCTG GACTGTACCA GCTATGGAAA GGCCGGGCAT GCTGCACGTG AAGAAGGTGA CAATGCCATT TATAAGGCGC TAAAGGATAT AGAATGGTTC CGCAATTATC GTTTTTCGAA GGTGTCCGAA ATGTTTGGCC CTTTAAAAAT GTCGGTTACC ATTATTAATG CAGGCTCGCA GCACAACGTA GTGCCCGCTT CCTGTATTTT TACAGTTGAT GTGAGGGTAA CTGATGCCTA TACCAATGAG GAAGTGTTAA AGATTATCCG GACCAATGTG GACTGCGAGG TTGTACCCCG CTCTATCCGG CTAAAACCTT CGTCAATTGA TAAGGAACAT CCCATCGTAC AGTCGGGTAT TGCCCTTGGA AGGACAACTT ATGGTTCACC TACCACATCG GACCAGGCCT TATTGAGCAT TCCTTCCTTA AAGGTTGGTC CTGGTGATTC TGCGCGGTCG CACATGGCGG ATGAGTATGT TCACCTGAGC GAAATTGAAA AGGGGATCGG ACTTTATATA GAAATGCTGA AGCCGGTTGT TAACGGGAAA TAA
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Protein sequence | MESDLFKESI KRDAVELLKQ LISIPSFSKE EDKTADAIEA FLQQRNIKTH RKLNNIWAYN KYFDAAKPTL LLNSHHDTVK PNSGYTRDPY AATVEDDKLY GLGSNDAGGC LVSLIATFLY YYDQEGLNYN ICLAATAEEE ISGNNGLECI LPDLGELEFA IVGEPTLMNL AIAERGLLVL DCTSYGKAGH AAREEGDNAI YKALKDIEWF RNYRFSKVSE MFGPLKMSVT IINAGSQHNV VPASCIFTVD VRVTDAYTNE EVLKIIRTNV DCEVVPRSIR LKPSSIDKEH PIVQSGIALG RTTYGSPTTS DQALLSIPSL KVGPGDSARS HMADEYVHLS EIEKGIGLYI EMLKPVVNGK
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