Gene Phep_4146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4146 
Symbol 
ID8255281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5017980 
End bp5018888 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content39% 
IMG OID644937811 
Producthypothetical protein 
Protein accessionYP_003094399 
Protein GI255534027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.185642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACC AAAATGATAT TGTAAATAAA GGTGACCGCA ATAAAATCTA TTTTCTTGTT 
GTGGTTATTG TTGCATTATT AGGTACCAAT CTTTATTTAT ATGTTAATGA CAGGCAGCAG
AACCAGCGTT TTGTGACTGT AAGTACAGAG AAGGACCGTT TAAAGCTTGA GGTAGAAAAG
ATAGAAGTGG AGCTGGATAA AGCAAATGGC CTGAATTTGG TGTTGAGCGA TAAATTGCAG
GAAGAGCAAA AGTTAGCAAG GGAAAAGATC GCAGCGCTAA AAATAGCCTT ACAAAAGAGC
TCGCTAACAG AAGGTAAACT GGCAGCAGCA CAAAGGGAAG TACAGGAACT GAGGGAATTT
GTTAAAAATC ATAACGATCA GATTTTCAGG CTGGAAAAAG AAAATGCAGA CTTAAAGAAC
CAGCGTGACA GTTTAAAAGA ATTTGCTTAT GCTGAAAGCC GCAAAGCGCA AGACCTGGCC
AGGAAGAATT CTGAACTGAA TGCAAAAGTA AAAACCGGCG CGTCCCTAAA GGCTACAAAT
GTTCAGGTTG CTGCCTACAA AGTAAAAAGC AATGGAAAGA ACATAGAGGT GACTCGTGCC
AGCACAGCAA AAAAACTAAG TGTGCGGTTT AGTATTGTAC CCAATCAACT GGCAGAAAAA
AACTATCATA AGATCTATCT CCGAATTTTT GACCCGGCAG GAAACCTGAT TGCCGATGAA
AATAATATGT TCGAAGCAGA CGGACAGGAA ATGCAGTATA CTTCATCTAC TTCTATATCC
TATAATGACG ACAATACGGC CTATAAGATG GACTGGATTA ATCCAAATGA ATTTATAAAA
GGGAATTATT CCATTATTTT ATACACTGAC GGCTTTACAA TGGGCAAAGC TTCAATCCTT
TTAAGATAA
 
Protein sequence
MSNQNDIVNK GDRNKIYFLV VVIVALLGTN LYLYVNDRQQ NQRFVTVSTE KDRLKLEVEK 
IEVELDKANG LNLVLSDKLQ EEQKLAREKI AALKIALQKS SLTEGKLAAA QREVQELREF
VKNHNDQIFR LEKENADLKN QRDSLKEFAY AESRKAQDLA RKNSELNAKV KTGASLKATN
VQVAAYKVKS NGKNIEVTRA STAKKLSVRF SIVPNQLAEK NYHKIYLRIF DPAGNLIADE
NNMFEADGQE MQYTSSTSIS YNDDNTAYKM DWINPNEFIK GNYSIILYTD GFTMGKASIL
LR