Gene Phep_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4143 
Symbol 
ID8255278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5012131 
End bp5013285 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content44% 
IMG OID644937808 
Producthypothetical protein 
Protein accessionYP_003094396 
Protein GI255534024 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.454782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTC AAACAGCCCT GGATAAGCCA GTAAGATTAT TATCCCTTGA TTTTTTCAGG 
GGTGCTACCG TTGCCGCGAT GATCCTGGTT AATAATCCCG GAGACTGGGG CCATATTTAT
GCCCCGCTTG AACATGCTGA ATGGAATGGC TGTACGCCAA CAGACCTGAT TTTCCCATTT
TTCCTGTTTA TTGTGGGGGT GTCTATCGCC TATGCAATGG GCGGTAAAAA AGCCGATCCT
TCATCTCATG GTAAAACTAT TGTTAAGGCC TTAAAAAGGG CATCGATCCT ATTCGGACTG
GGTTTGTTTT TATCCCTTTT CCCTAAAGTT TTTACAGCAC CTCTTGAAGC GTTTCAACAG
GTACGCATTC CGGGTGTATT GCAACGTATT GCGGTAGTGT TCTTGATTTC AGCCATTATC
TTCCTTAAAA ACACAGAGAA AAATATCTTT AAAATTTTAT TAGCTATACT GGCCGTTTAC
TGGGCTTTAA TGACCTTTAT TCCGGTACCC GGGGTCGGCT ATGCCAACCT GGAGAAAGAA
ACCAATCTAG GGGCCTGGCT GGACAGGAGC ATCCTTACAG AAGCCCATTT ATGGAAATCG
GCCAAAACAT GGGATCCGGA AGGCATACTG AGTACCCTGC CCGCTATTGC AACCGGACTG
TTCGGAATCT TGGTTGGCGT GTATTTAAAG CGCAAAGATG TGGATGCCGC AACAAAAATT
TCCTGGTTGT TTTGTACAGG ATGTGCCGCT GTAGCTTTAG GCCTGCTTTG GGACCTTCAG
TTCCCGATCA ATAAATCTTT ATGGACCAGT TCATTTGTAC TTTATACGGG TGGCCTGGCC
ACGATGATCC TCTCTTTATG TTATTGGATC ATCGACGTTC AGCAATACAA CCGTTTTACC
AAGCCATTTG TGGTATATGG AGTAAATGCA ATTACGGTTT TCTTTTTATC CGGTCTGATC
CCCAGAATAT TCCGCATGAT TACAGTTAAG GGGTCCAACG GATCGGATAT GAACCTTCAG
TCCTGGTTGT ATTCAGGCTT TGCGGCATCT TTTTCGCCCA TCAATGCCTC GCTGGCCTGG
GCCATTAGTT TTATTTTGTT CTGGCTTGTG ATTCTATGGG TGATGTACAA CAAAAAAATC
ATTATAAAAG TTTAA
 
Protein sequence
MTAQTALDKP VRLLSLDFFR GATVAAMILV NNPGDWGHIY APLEHAEWNG CTPTDLIFPF 
FLFIVGVSIA YAMGGKKADP SSHGKTIVKA LKRASILFGL GLFLSLFPKV FTAPLEAFQQ
VRIPGVLQRI AVVFLISAII FLKNTEKNIF KILLAILAVY WALMTFIPVP GVGYANLEKE
TNLGAWLDRS ILTEAHLWKS AKTWDPEGIL STLPAIATGL FGILVGVYLK RKDVDAATKI
SWLFCTGCAA VALGLLWDLQ FPINKSLWTS SFVLYTGGLA TMILSLCYWI IDVQQYNRFT
KPFVVYGVNA ITVFFLSGLI PRIFRMITVK GSNGSDMNLQ SWLYSGFAAS FSPINASLAW
AISFILFWLV ILWVMYNKKI IIKV