Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4143 |
Symbol | |
ID | 8255278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 5012131 |
End bp | 5013285 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937808 |
Product | hypothetical protein |
Protein accession | YP_003094396 |
Protein GI | 255534024 |
COG category | [S] Function unknown |
COG ID | [COG4299] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.454782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCTC AAACAGCCCT GGATAAGCCA GTAAGATTAT TATCCCTTGA TTTTTTCAGG GGTGCTACCG TTGCCGCGAT GATCCTGGTT AATAATCCCG GAGACTGGGG CCATATTTAT GCCCCGCTTG AACATGCTGA ATGGAATGGC TGTACGCCAA CAGACCTGAT TTTCCCATTT TTCCTGTTTA TTGTGGGGGT GTCTATCGCC TATGCAATGG GCGGTAAAAA AGCCGATCCT TCATCTCATG GTAAAACTAT TGTTAAGGCC TTAAAAAGGG CATCGATCCT ATTCGGACTG GGTTTGTTTT TATCCCTTTT CCCTAAAGTT TTTACAGCAC CTCTTGAAGC GTTTCAACAG GTACGCATTC CGGGTGTATT GCAACGTATT GCGGTAGTGT TCTTGATTTC AGCCATTATC TTCCTTAAAA ACACAGAGAA AAATATCTTT AAAATTTTAT TAGCTATACT GGCCGTTTAC TGGGCTTTAA TGACCTTTAT TCCGGTACCC GGGGTCGGCT ATGCCAACCT GGAGAAAGAA ACCAATCTAG GGGCCTGGCT GGACAGGAGC ATCCTTACAG AAGCCCATTT ATGGAAATCG GCCAAAACAT GGGATCCGGA AGGCATACTG AGTACCCTGC CCGCTATTGC AACCGGACTG TTCGGAATCT TGGTTGGCGT GTATTTAAAG CGCAAAGATG TGGATGCCGC AACAAAAATT TCCTGGTTGT TTTGTACAGG ATGTGCCGCT GTAGCTTTAG GCCTGCTTTG GGACCTTCAG TTCCCGATCA ATAAATCTTT ATGGACCAGT TCATTTGTAC TTTATACGGG TGGCCTGGCC ACGATGATCC TCTCTTTATG TTATTGGATC ATCGACGTTC AGCAATACAA CCGTTTTACC AAGCCATTTG TGGTATATGG AGTAAATGCA ATTACGGTTT TCTTTTTATC CGGTCTGATC CCCAGAATAT TCCGCATGAT TACAGTTAAG GGGTCCAACG GATCGGATAT GAACCTTCAG TCCTGGTTGT ATTCAGGCTT TGCGGCATCT TTTTCGCCCA TCAATGCCTC GCTGGCCTGG GCCATTAGTT TTATTTTGTT CTGGCTTGTG ATTCTATGGG TGATGTACAA CAAAAAAATC ATTATAAAAG TTTAA
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Protein sequence | MTAQTALDKP VRLLSLDFFR GATVAAMILV NNPGDWGHIY APLEHAEWNG CTPTDLIFPF FLFIVGVSIA YAMGGKKADP SSHGKTIVKA LKRASILFGL GLFLSLFPKV FTAPLEAFQQ VRIPGVLQRI AVVFLISAII FLKNTEKNIF KILLAILAVY WALMTFIPVP GVGYANLEKE TNLGAWLDRS ILTEAHLWKS AKTWDPEGIL STLPAIATGL FGILVGVYLK RKDVDAATKI SWLFCTGCAA VALGLLWDLQ FPINKSLWTS SFVLYTGGLA TMILSLCYWI IDVQQYNRFT KPFVVYGVNA ITVFFLSGLI PRIFRMITVK GSNGSDMNLQ SWLYSGFAAS FSPINASLAW AISFILFWLV ILWVMYNKKI IIKV
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