| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4137 |
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| Symbol | |
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| ID | 8255272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 5001604 |
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| End bp | 5002362 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644937802 |
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| Product | regulatory protein LuxR |
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| Protein accession | YP_003094390 |
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| Protein GI | 255534018 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.272227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATACCG ATCTACAAAA ACTTCATGAT GTTTGGATGT CTAGCAGGGC TTTTCAAAAC
ACAGATGCTC CAAAAATCAG TTTCGATGAC TTAACCAATT CCATTGTCAG CACCGGACCA
TTCTATTATT ATATCATTGA TTTTTATGAC ATGGTACTTT CTCATGTCAG TCATTCAATT
GCCGATATAC ATGGCCTGAA TCCGCAAACG GTGACTTTTG ATGATATATT AAACACGATC
CATCCGGATG ATATAGAATT TGTTGCCAAT GCAGAGTCTT TTCTTCACCG GTTTTTTCAG
GAAAAGATCC CTCCTGAGAG ATTGCTTAGT TATAAAATGA GCTATAGTTT TAGAAGCAGG
ATGAAAAACG GAGAATATGT GCTGCTTAAT CACCAGGCTT TGCTGCTCAC ACTGGACGAG
AACGGGCGCT CAGGAAAGTC ATTGAACATC CACACCCGGA TAGACCACCT CAGTAAGTTC
AATACCCGCC AAATCTCATT GATTGGTTTA AACGGGGAAC CTTCGTTTAT GGATATGTCT
TTGGACAAAT CCATTCATGA CCTGCCAGCT TTTTCCAGAC GGGAGATGGA AATTATCAGG
TTGATTGCCC AGGGGCTGAA CAACAATGAG ATTGCTGAAA ATCTGTTCAT CGCGGTACTA
ACGGTCAAAA AACACCGGAA AAACATTTTA ATGAAATCCA ATTGTAAAAA TACAGCCGAG
CTGATCAGTA AGAGTGTGAT ACAGGGTCTG ATTTATTAA
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| Protein sequence | MNTDLQKLHD VWMSSRAFQN TDAPKISFDD LTNSIVSTGP FYYYIIDFYD MVLSHVSHSI
ADIHGLNPQT VTFDDILNTI HPDDIEFVAN AESFLHRFFQ EKIPPERLLS YKMSYSFRSR
MKNGEYVLLN HQALLLTLDE NGRSGKSLNI HTRIDHLSKF NTRQISLIGL NGEPSFMDMS
LDKSIHDLPA FSRREMEIIR LIAQGLNNNE IAENLFIAVL TVKKHRKNIL MKSNCKNTAE
LISKSVIQGL IY
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