| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4112 |
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| Symbol | |
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| ID | 8255246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4966158 |
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| End bp | 4969298 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644937776 |
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| Product | Tetratricopeptide domain protein |
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| Protein accession | YP_003094365 |
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| Protein GI | 255533993 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGACA CCAAGATTAA AGAAAAAGCG ATCATCAGAA AGGAACTTAT TGTACTTAAA
ACGTATCCCT ATTCGGATCC GAGTCCCATT CCTGAGTTTG GACGCCTGTA TCCTTATAAC
CGTTTTGATG GATACACCAA TAAAAGCATA GAACAGACCT GGGAAATGAT TGTTATGGAA
AACAATCACA TCAAAATCTG GATCAATCCA GCTGTAGGGG GAAAAATATG GGGTGCCATA
GAAAAATCGA CAACAAGGGA ATTTATATAT TTTAACCATG CAGCAAAATT CAGAGATGTA
GCCATGAGAG GTCCCTGGAC TTCCGGTGGC ATGGAAATCA ATATGGGCAT CATCGGGCAT
ACTCCCTCCT GTTCGGCTCC GGTTGACTAC AAAACAATTG AGAATGAAGA TGGCAGTGTA
AGCTGCTTTA TCGGGGCCAC GGACTGGCCC TCCCGTACAG AATGGCGTGT AGAAATAAAA
CTGGGTAAAG ATGCTGCACA TTTTAGCACT AAAAGTTGGT GGCACAACAA TAGTTGTATG
TCCCAGTCCT ACTATCAATG GAACAATGTG GGTATTAAAA CCTCCGGAAA CCTGGAATAC
ATCTACCCGG GGCAGCATCG TTTAGGACAC GATGGAGTAC CACAGAGCTG GCCTGAGGAT
GACGAAAAAA GAAAAATTTC TTTCTACGAC CAGAATAATT ATGGTGAATA TAAATCCTAT
CATGTTTTTG GCGCCTATAC CGATTTTTGG GGGTGTTACT GGCATAATGA TCAGTTTGGC
ATGGGACATT CTGCTCCTTA TGACGAAAAA CCAGGAAAAA AGATATGGAT TTGGGGACTT
TCGCGTTATG GTATGATCTG GGAAGATCTT TTAACAGACG AGGATGGCCA GTACACAGAG
GTTCAAAGTG GTCGTTTATT TAATCAAAGT ATTGCTGCCA GCTCTAAAAC CCCGTTTAAA
CACAGGTCAT TTTTACCCTA TACTTACGAT ACCTGGGAAG AACATTGGTT TCCGGTTAAA
AACACTGGAG GATTAACCTA TGGCAATCAA CAACTTTCAT TTTATATAAC TGTACAAGAA
GGAAACCAAT TGATTAATAT CTGTGCCAAT GAAAGCCTGG ATGATCATTT TAAAGTTTTT
CACCACACTA AGGAAATCCT TTCAACACAG CTTAGAATGA AAGCAATGCA GAACTGCAGC
TTCGGACTTC CATACCCTGT AAAAGCAGCC GAATTACTGG TAACGTTAAA TGATTCGATA
ATATACAATG GCCCTGAACA GCATACAGTA TTAAAAAGAC CCACAAAACT GAGTAAGGAC
TACAATTTCG ATTCGGTACA AGCGCATTGC ATTCAGGCAA AGGAATGGGA AAGACAACGT
TTTTTTGACC GAGCAATAAC GCATTATCAG ATTTGCCTGG ACCTGGACCC CTTTTATACA
GAAGCGCTTA GCGGCCTGGC AGGTCTTTAT TTTAAACAAC TTAAATTTAC TGAAGCACTG
AACCTTTTAA GTATTGTATT ATCTGTTGAT ACGTATGACC CGGAGGCCAA TTATTTATAT
GGACTGGTAA ATGAAAGGTT ACGAAATACA GCAGACGCAA AGGATGGTTT TTCTATTGCC
AGTCAATCTG TCGAGTATAG GGTTGCATCA TTTATAGCTC TGGCAAAAAT GTTACTGCGT
GAAGGTCAGA TTGAAAAGGC ATATGCTTAT GTAAAAAAAG CAAGATTGTA TAGCCCGGAC
AATCTCCAAT CTTTATATTT AAGCATCATT ATAAACAATC TTAAAGGAAA TAAAAAACAG
TCGATGCTAC TGATCAAACA GCTTTTACAT ACAGACCCCA TTAATTACCT GGCAAAATTT
GAATTAAACA AAGCAGAAGG CATCCCGCTG GACAAAATTA CCGTAAGTGA ACTTCCTTAT
GAAACTTATA CAGAACTGGC TGCCTTCTAT TACAATGTAA ACCTGTATAG TGAAGCGCTT
AAACTATTGG AAGCAGCCCC TGATTACGCA ATGGTTTATC TTTGGAAAGC TTATCTATAT
TCGCTTTCCG ATTCGAAAAC TACTATTGCC AGTGCACTGG AAAAGGCAGT GGCAATGAGG
CCTGATTTTG TTTTTCCGCA TCGTGAAGAG GACATTACAG TATTGAACTG GGCAATTAGC
CAGCACAATG CCTGGCAGTT TAAATATTAT CTTGCACTTG CCCATATCCA GAACCTGCGC
AGAGAAGAAG CATTGAGTCT TTTAAACAGC TGTCAGCAGC TGCCCGACTT CTATCCTTTT
TATATTGTAC GGGCAAACTT AAAAGAGGAA TTGCAGAAGG ACGGCTGCCT TTCTGACCTA
AAAAAAGCCT TTCAGCTTGC ACCCGATGAA TGGAGGACAG TTCTAAACCT TTCCAATTAC
TACGCTGCAC ATGAGGACTG GGTGCAGGCA CTCAACATCA CCAGTAAAGG ATATAAAATG
TATCCCGACA ATTATTATTT AGGGCTGAAA CTTGCAAAAT GCTTTATGCA TACGCATAAA
TTTGAACAAG GGATTGCCCT GATGACCAAT ATGACCGTAT TGCCAAATGA GGGGGCCTCT
GAAGGCAGGA ACAGCTGGCG GGAAACTCAC CTGCTCTGTG CGTTTAACGC GCTTGAAGAT
AAGAACCAGG AAAAAGCGAC ACATCATATC AATATGGCTA GGACATGGCC TGAAAACATG
GGCATTGGCA AACCTCATCA TGTTGATGAG CGCCTCGAAG ACTACATGCA GCTTATCTGT
ATAGATCATG AAAATAAAGA AGAACGAAAG GCACTAACGG ATAAAATAAC AAGTTACAGA
ATGCACCATA AACTCAGTCC TTATGGTATA CTTGACTTCA TCAGCATTTT TCTTATGCAG
GAAATGGGTG ATGTAAAAGG TGCAGAAAGA ATCCTGGACA ACTGGTTAAA ACAAGATCCT
GATGCTTTAC CGCTAAAATG GAGCATCGCA TTTTTAAAAG GCAACCAACA GGAATTGGCT
GAACTTTCTC AACAGAAGGT TCCGGTTAAA GAGGTTCTGC CTTATGAAGT GCCATTTGAA
GACCGGTCCT TTCCTTTCGT AAAAAAATTA CACAGTATTG GATTATTTAA CAAGCATACA
CATTTAGCTA CAATGAATTA A
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| Protein sequence | MEDTKIKEKA IIRKELIVLK TYPYSDPSPI PEFGRLYPYN RFDGYTNKSI EQTWEMIVME
NNHIKIWINP AVGGKIWGAI EKSTTREFIY FNHAAKFRDV AMRGPWTSGG MEINMGIIGH
TPSCSAPVDY KTIENEDGSV SCFIGATDWP SRTEWRVEIK LGKDAAHFST KSWWHNNSCM
SQSYYQWNNV GIKTSGNLEY IYPGQHRLGH DGVPQSWPED DEKRKISFYD QNNYGEYKSY
HVFGAYTDFW GCYWHNDQFG MGHSAPYDEK PGKKIWIWGL SRYGMIWEDL LTDEDGQYTE
VQSGRLFNQS IAASSKTPFK HRSFLPYTYD TWEEHWFPVK NTGGLTYGNQ QLSFYITVQE
GNQLINICAN ESLDDHFKVF HHTKEILSTQ LRMKAMQNCS FGLPYPVKAA ELLVTLNDSI
IYNGPEQHTV LKRPTKLSKD YNFDSVQAHC IQAKEWERQR FFDRAITHYQ ICLDLDPFYT
EALSGLAGLY FKQLKFTEAL NLLSIVLSVD TYDPEANYLY GLVNERLRNT ADAKDGFSIA
SQSVEYRVAS FIALAKMLLR EGQIEKAYAY VKKARLYSPD NLQSLYLSII INNLKGNKKQ
SMLLIKQLLH TDPINYLAKF ELNKAEGIPL DKITVSELPY ETYTELAAFY YNVNLYSEAL
KLLEAAPDYA MVYLWKAYLY SLSDSKTTIA SALEKAVAMR PDFVFPHREE DITVLNWAIS
QHNAWQFKYY LALAHIQNLR REEALSLLNS CQQLPDFYPF YIVRANLKEE LQKDGCLSDL
KKAFQLAPDE WRTVLNLSNY YAAHEDWVQA LNITSKGYKM YPDNYYLGLK LAKCFMHTHK
FEQGIALMTN MTVLPNEGAS EGRNSWRETH LLCAFNALED KNQEKATHHI NMARTWPENM
GIGKPHHVDE RLEDYMQLIC IDHENKEERK ALTDKITSYR MHHKLSPYGI LDFISIFLMQ
EMGDVKGAER ILDNWLKQDP DALPLKWSIA FLKGNQQELA ELSQQKVPVK EVLPYEVPFE
DRSFPFVKKL HSIGLFNKHT HLATMN
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