Gene Phep_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4079 
Symbol 
ID8255213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4921272 
End bp4922486 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content44% 
IMG OID644937743 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003094332 
Protein GI255533960 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.294858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCACA ATCAACCAGT ATATACAGAT AATGATCCGC AGAGTGAGTT GGTGACCCTT 
AACCTGGGCC CTACACACCC GGCAACACAT GGTGTTTTTC AGAATGTGTT ACAGATGGAT
GGAGAGCGCA TTGTAAGTGG TGTGTCTACC ATAGGGTATA TTCACCGTGC CTTTGAAAAA
ATAGCTGAAC ACAGGCCTTT TTACCAGATC ACCCCTCTAA CAGACAGGTT AAACTATTGC
TCATCGCCCA TCAACAATAT GGGCTGGCAC ATGACGGTAG AAAAACTATT GAACATACAG
ATGCCAAAGC GTGTGGATTA CCTGCGGGTA ATTATCATGG AGCTGGCGCG TATTTCTGAC
CACATCATCT GTAACACGAT CATTGGGCAG GATACCGGTG CCACTACCAC CTTTTTGTAC
CTGTTTCAGT TCAGAGAGCA TATTTATGAG ATTTACGAAG AGATCTGTGG GGCCCGTTTA
ACCACAAATA TTGGTCGGAT TGGTGGGTTT GAGCGCGATT TTAATGCTAT TGCCTTTGCC
AAGATCAATA AATTTTTAAA AGAGTTCCCT GTGGCTTTAC GCGAATTTGA AAATTTGCTG
AACCGCAACA GGATCTTTAT AGACCGTACC TCGGGTGTGG CCTGCGTTAC AGCAGAGCAG
GCTTTGGACT ACAGCTGGAC TGGTCCTTTA CTGCGTGCCA CCGGGGTGGA TTATGATGTT
CGGGTAAGTG AGCCCTATTC TTCTTATGAG GATTTCGATT TTGAAGTTCC AGTAGGTACT
GCCGGCGATA TTTACGACCG TTACCTGGTG CGTAATGAAG AAATGTGGCA GAGTGTGCGT
CTGATTGAAC AGGCTTTGGA GAAATTGAAA AAGGAACCAG CTGGTATTTT TCATGCTGAT
GTTCCGGAAT TCTATTTGCC GGCCAAAGAA GAAGTATACA ACAATATGGA AGCATTGATC
TATCACTTTA AAATTGTGAT GGGAGAAATC GATGCCCCTA AGGCAGAAGT TTACCACGCG
GTAGAGGGTG GTAACGGTGA GCTTGGCTTT TATCTGATCA ACGACGGTGG AAGAACACCT
TACCGTTTGC ATTTCAGGAG ACCTAGTTTT ATAAATTATC AAATGTTTGC ACCCATGAGT
AAAGGTATGT TGTTATCGGA TGCCATTATC AACATGAGTA GCATGAATAT TATTGCAGGA
GAATTAGATG CTTAA
 
Protein sequence
MNHNQPVYTD NDPQSELVTL NLGPTHPATH GVFQNVLQMD GERIVSGVST IGYIHRAFEK 
IAEHRPFYQI TPLTDRLNYC SSPINNMGWH MTVEKLLNIQ MPKRVDYLRV IIMELARISD
HIICNTIIGQ DTGATTTFLY LFQFREHIYE IYEEICGARL TTNIGRIGGF ERDFNAIAFA
KINKFLKEFP VALREFENLL NRNRIFIDRT SGVACVTAEQ ALDYSWTGPL LRATGVDYDV
RVSEPYSSYE DFDFEVPVGT AGDIYDRYLV RNEEMWQSVR LIEQALEKLK KEPAGIFHAD
VPEFYLPAKE EVYNNMEALI YHFKIVMGEI DAPKAEVYHA VEGGNGELGF YLINDGGRTP
YRLHFRRPSF INYQMFAPMS KGMLLSDAII NMSSMNIIAG ELDA