Gene Phep_4076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4076 
Symbol 
ID8255210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4918372 
End bp4919376 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content45% 
IMG OID644937740 
Productferredoxin 
Protein accessionYP_003094329 
Protein GI255533957 
COG category[C] Energy production and conversion 
COG ID[COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.505676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA AAGTTAAGGT AACCATAGAC GGAATAACAG TAGAAGTAGC GCCAGGTACC 
TCTATTCTGA ATGCTGCCAG GCAGATAGGG GGGGATATTG TACCGCCTGC AATGTGCTAT
TATTCTAAAT TAGAAGGCAG TGGCGGTAAG TGCCGTACCT GTATTGTTAA GGTAAGCAAG
GGTTCTGAAA AGGATCCCCG TCCGATGCCC AAACTGGTTG CATCATGCCG TACCACAGTA
ATGGATGGCA TGGAAGTGAT GAACATTACT TCGCCTGAAG TAATTGAAGC ACGCAGTGGC
GTGGTAGAAA TGCTGCTGAT CAACCATCCG CTGGATTGCC CGGTTTGCGA CCAGGCCGGC
GAGTGCGACC TTCAGAATTT GGGTTATGAG CATGGTTTAC AGAAAACCAG ATATGAGTTT
GAGCGCCGTA CTTTTGAACG TATAGACATT GGCGATAAGA TACAGCTGCA CATGAACAGG
TGCATTTTAT GCTACCGTTG TGTGTTTACT GCCGATCAGA TCACGAATAA AAGGGTACAT
GGCATATTGA ACAGGGGCGA CCATTCGGAG ATTTCCACTT ATATTCAGAC TGCGGTAGAC
AATGATTTTT CGGGCAACGT AATTGATGTT TGTCCGGTTG GTGCCTTAAC AGATAAAACG
TTCAGGTTTA AGAACCGGGT ATGGTTTACC AAACCTATTG ATGCACACAG AGATTGCCCT
ACCTGTAGTG GTAAGGTGAC CTTATGGTAT AAAGGAGAGG ATGTACTGAG GGTTACTGCA
AGAAAAGACA TTTACGGTGA GGTGGAGGAA TTTATCTGCA ATACCTGCAG GTTTGACAAG
AAAAAAACGT CTGACTGGGT AATTGAGCAT CCGACACACA TCAGTGATAC TTCTGTGATT
TCCTCTAACC ACTATGAAAC TTTAAAACCC CTGCCGGTCA TTCAAAATAA CCCGCAATTG
CAGGCAGCGA ATAAGGTTGA ACTAGAAAAA ACCACTAAAT TCTAA
 
Protein sequence
MSDKVKVTID GITVEVAPGT SILNAARQIG GDIVPPAMCY YSKLEGSGGK CRTCIVKVSK 
GSEKDPRPMP KLVASCRTTV MDGMEVMNIT SPEVIEARSG VVEMLLINHP LDCPVCDQAG
ECDLQNLGYE HGLQKTRYEF ERRTFERIDI GDKIQLHMNR CILCYRCVFT ADQITNKRVH
GILNRGDHSE ISTYIQTAVD NDFSGNVIDV CPVGALTDKT FRFKNRVWFT KPIDAHRDCP
TCSGKVTLWY KGEDVLRVTA RKDIYGEVEE FICNTCRFDK KKTSDWVIEH PTHISDTSVI
SSNHYETLKP LPVIQNNPQL QAANKVELEK TTKF