Gene Phep_4046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4046 
Symbol 
ID8255180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4889740 
End bp4890288 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content46% 
IMG OID644937710 
Producttransferase hexapeptide repeat containing protein 
Protein accessionYP_003094299 
Protein GI255533927 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.935376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA CTTTACTTTT ACATAAGATG AATTTATTTA GTTACTTATT CCAGGATTGG 
GCGGCAAATC CTAAGAACAT TAAAGGGCGC TTTGTGCTGT TTCTGTTCCG GCTGGTACAG
GTGATCAGCA GGTATACCCT GTTGAAGATC ATTTTCATTT TATACCTGGC CTTTTATCAT
TATTATGTAG AATGGGTGCT GGGAATTGAA CTGCCCAGGA AACTGACAGT TGGAAAAGGC
CTGATGTTAT ACCATGGACA GGCATTGGTG GTAAACCAGG GGGTAGTGAT GGGCGAAGGC
TGTACGCTGC GGAACTCGGT AACGATAGGG CATAAAAAGC TGGCCGACGG GACTTTCAGC
GGGTGTCCGA GGATAGGGAA CCATGTAGAC ATTGGTGCGA ACGTGTGCAT TATAGGGGAT
GTTGAAATTG GCGACCATGT AACGATTGGT GCCGGGGCTG TAGTTACAAA GAGTGTTCCT
GCCCATAGCA CAGTGGTGGG CAACCCGGCG CGGATTCTGG AAAAGAAAAA CGGGGAAGCA
CAGATTTAA
 
Protein sequence
MKNTLLLHKM NLFSYLFQDW AANPKNIKGR FVLFLFRLVQ VISRYTLLKI IFILYLAFYH 
YYVEWVLGIE LPRKLTVGKG LMLYHGQALV VNQGVVMGEG CTLRNSVTIG HKKLADGTFS
GCPRIGNHVD IGANVCIIGD VEIGDHVTIG AGAVVTKSVP AHSTVVGNPA RILEKKNGEA
QI