Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4016 |
Symbol | |
ID | 8255150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4859390 |
End bp | 4860220 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937680 |
Product | amidohydrolase 2 |
Protein accession | YP_003094269 |
Protein GI | 255533897 |
COG category | [R] General function prediction only |
COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAA TTGATGCCCA TCAGCATTTC TGGATATATG ATACGTTAAG GGACAGCTGG ATCACCGAGG ATATGGCGGT GTTGAGGGCA GATTTTAAGC CTGAACAGCT ATTACCCTTA CTTCAGCAGC ATCATTTTGA CGGGAGTGTT GTTGTACAGT CGGACCAGTC GGCAGCCGAA AATCTTTTTC AGCTTAAAAA TGCAGCTGAG AATGACTTTG TGAAAGGTGT TGTAGGTTGG GTTGATTTGC AGGCCCCGGA TATTGAAGTG CAGCTTTCGG TTCTACAGGA ATACGATAAG TTAAAGGGTT TCAGGCATAT TTTACAAGGT GAACAAGACC GTGCACTAAT GCTGAGGCCG GAATTTTCAA ACGGCATAGG TAAGCTCAGA CCGTTTGGTT ATACCTATGA TATCCTGATT TTTCCGGATC AGCTAAGATA CGCTGCTGAA CTGGTTTCAA GGTTTCCGGA CCAGCCCTTT GTGCTGGACC ATATGGCAAA GCCAGACATT AAAAACGGAA ATACCGGGGA TTGGAAAAAG GATATTGTTG CTTTGGCCAA GTATGAAAAT GTCTACTGCA AAGTCTCGGG AATGGTAACT GAGGCCGACT GGCAACATTG GAAACCGGAA GATTTTGAAC CTTATCTGGA CGTTGTTTTT GAAGCTTTCG GACCGGCAAG GCTAATGTAT GGATCTGACT GGCCGGTTTG TCTGGTGGCA GCGGCTTACC AGCGGGTACT TGGTATAATG GAACAGTATA CTTTAAAATT ATCTGCCGAT GAACAAAGTA TGTTCTGGGG TGGTAATGCA ACAAAATTCT ATAATCTATA A
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Protein sequence | MLKIDAHQHF WIYDTLRDSW ITEDMAVLRA DFKPEQLLPL LQQHHFDGSV VVQSDQSAAE NLFQLKNAAE NDFVKGVVGW VDLQAPDIEV QLSVLQEYDK LKGFRHILQG EQDRALMLRP EFSNGIGKLR PFGYTYDILI FPDQLRYAAE LVSRFPDQPF VLDHMAKPDI KNGNTGDWKK DIVALAKYEN VYCKVSGMVT EADWQHWKPE DFEPYLDVVF EAFGPARLMY GSDWPVCLVA AAYQRVLGIM EQYTLKLSAD EQSMFWGGNA TKFYNL
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