Gene Phep_4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4016 
Symbol 
ID8255150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4859390 
End bp4860220 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content44% 
IMG OID644937680 
Productamidohydrolase 2 
Protein accessionYP_003094269 
Protein GI255533897 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAA TTGATGCCCA TCAGCATTTC TGGATATATG ATACGTTAAG GGACAGCTGG 
ATCACCGAGG ATATGGCGGT GTTGAGGGCA GATTTTAAGC CTGAACAGCT ATTACCCTTA
CTTCAGCAGC ATCATTTTGA CGGGAGTGTT GTTGTACAGT CGGACCAGTC GGCAGCCGAA
AATCTTTTTC AGCTTAAAAA TGCAGCTGAG AATGACTTTG TGAAAGGTGT TGTAGGTTGG
GTTGATTTGC AGGCCCCGGA TATTGAAGTG CAGCTTTCGG TTCTACAGGA ATACGATAAG
TTAAAGGGTT TCAGGCATAT TTTACAAGGT GAACAAGACC GTGCACTAAT GCTGAGGCCG
GAATTTTCAA ACGGCATAGG TAAGCTCAGA CCGTTTGGTT ATACCTATGA TATCCTGATT
TTTCCGGATC AGCTAAGATA CGCTGCTGAA CTGGTTTCAA GGTTTCCGGA CCAGCCCTTT
GTGCTGGACC ATATGGCAAA GCCAGACATT AAAAACGGAA ATACCGGGGA TTGGAAAAAG
GATATTGTTG CTTTGGCCAA GTATGAAAAT GTCTACTGCA AAGTCTCGGG AATGGTAACT
GAGGCCGACT GGCAACATTG GAAACCGGAA GATTTTGAAC CTTATCTGGA CGTTGTTTTT
GAAGCTTTCG GACCGGCAAG GCTAATGTAT GGATCTGACT GGCCGGTTTG TCTGGTGGCA
GCGGCTTACC AGCGGGTACT TGGTATAATG GAACAGTATA CTTTAAAATT ATCTGCCGAT
GAACAAAGTA TGTTCTGGGG TGGTAATGCA ACAAAATTCT ATAATCTATA A
 
Protein sequence
MLKIDAHQHF WIYDTLRDSW ITEDMAVLRA DFKPEQLLPL LQQHHFDGSV VVQSDQSAAE 
NLFQLKNAAE NDFVKGVVGW VDLQAPDIEV QLSVLQEYDK LKGFRHILQG EQDRALMLRP
EFSNGIGKLR PFGYTYDILI FPDQLRYAAE LVSRFPDQPF VLDHMAKPDI KNGNTGDWKK
DIVALAKYEN VYCKVSGMVT EADWQHWKPE DFEPYLDVVF EAFGPARLMY GSDWPVCLVA
AAYQRVLGIM EQYTLKLSAD EQSMFWGGNA TKFYNL